Gene name: MRPL9
Reference locus (S288C): YGR220C
Gene biotype: protein_coding
Description: Mitochondrial 54s ribosomal protein yml9; Mitochondrial ribosomal protein of the large subunit
Top 10 interactors (score): MRP20 (0.999); MRP4 (0.999); MRP7 (0.999); IMG1 (0.999); MRPS5 (0.999); MRPL6 (0.999); MRPL24 (0.999); MRPL4 (0.999); RML2 (0.999); MRPS9 (0.999); MRP17 (0.999); RSM23 (0.999); MRPS16 (0.999); YML6 (0.999); MRPL10 (0.999); RTC6 (0.999); MRPS28 (0.999); MRPL23 (0.999); MRPL16 (0.999); MRPS17 (0.999)
Homologues (species, bitscore): MRPL3 (Homo sapiens, 142.1); Mrpl3 (Mus musculus, 142.1); mrpl3 (Danio rerio, 152.9); mrpl3 (Xenopus tropicalis, 124.8); mRpL3 (Drosophila melanogaster, 146.0); mrps-18C (Caenorhabditis elegans, 94.7); RPL3P (Arabidopsis thaliana, 173.7)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:901378-902187:- | gene-YGR220C_AKU4011 | rna-NM_001181349.1_AKU4011 | cds-NP_011736.1_AKU4011 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000021.1:181600-182409:- | gene-YGR220C_BG1 | rna-NM_001181349.1_BG1 | cds-NP_011736.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:909082-909891:- | gene-YGR220C_Bruggeman | rna-NM_001181349.1_Bruggeman | cds-NP_011736.1_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:907332-908141:- | gene-YGR220C_CAT1 | rna-NM_001181349.1_CAT1 | cds-NP_011736.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:904328-905137:- | gene-YGR220C_CBS1585 | rna-NM_001181349.1_CBS1585 | cds-NP_011736.1_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:908008-908817:- | gene-YGR220C_CBS436 | rna-NM_001181349.1_CBS436 | cds-NP_011736.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:895198-896007:- | gene-YGR220C_CBS6412 | rna-NM_001181349.1_CBS6412 | cds-NP_011736.1_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:901257-902066:- | gene-YGR220C_CBS6413 | rna-NM_001181349.1_CBS6413 | cds-NP_011736.1_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:935656-936465:- | gene-YGR220C_CENPK1137D | rna-NM_001181349.1_CENPK1137D | cds-NP_011736.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:889708-890517:- | gene-YGR220C_EthanolRed | rna-NM_001181349.1_EthanolRed | cds-NP_011736.1_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:894099-894908:- | gene-YGR220C_FaliES1 | rna-NM_001181349.1_FaliES1 | cds-NP_011736.1_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000076.1:135357-136166:+ | gene-YGR220C_JAY291 | rna-NM_001181349.1_JAY291 | cds-NP_011736.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:906997-907806:- | gene-YGR220C_MUCL30387 | rna-NM_001181349.1_MUCL30387 | cds-NP_011736.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:906253-907062:- | gene-YGR220C_MUCL30388 | rna-NM_001181349.1_MUCL30388 | cds-NP_011736.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:899405-900214:- | gene-YGR220C_MUCL39482 | rna-NM_001181349.1_MUCL39482 | cds-NP_011736.1_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:917957-918766:- | gene-YGR220C_MUCL42920 | rna-NM_001181349.1_MUCL42920 | cds-NP_011736.1_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:936074-936883:- | gene-YGR220C_NCIM3186 | rna-NM_001181349.1_NCIM3186 | cds-NP_011736.1_NCIM3186 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:895057-895866:- | gene-YGR220C_NCYC1407 | rna-NM_001181349.1_NCYC1407 | cds-NP_011736.1_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:919995-920804:- | gene-YGR220C_PE2H3 | rna-NM_001181349.1_PE2H3 | cds-NP_011736.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:925105-925914:- | gene-YGR220C_PE2H4 | rna-NM_001181349.1_PE2H4 | cds-NP_011736.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:936074-936883:- | gene-YGR220C_S288C | rna-NM_001181349.1_S288C | cds-NP_011736.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000045.1:64881-65690:+ | gene-YGR220C_SA1 | rna-NM_001181349.1_SA1 | cds-NP_011736.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:914610-915419:- | gene-YGR220C_ThermosaccDry | rna-NM_001181349.1_ThermosaccDry | cds-NP_011736.1_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:1019423-1020232:- | gene-YGR220C_VR1 | rna-NM_001181349.1_VR1 | cds-NP_011736.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000016.1:216045-216854:- | gene-YGR220C_ZTW1 | rna-NM_001181349.1_ZTW1 | cds-NP_011736.1_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:906675-907484:- | gene-YGR220C_Sparadoxus | rna-NM_001181349.1_Sparadoxus | cds-NP_011736.1_Sparadoxus | 89.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |