Gene name: MRPL8
Reference locus (S288C): YJL063C
Gene biotype: protein_coding
Description: Mitochondrial 54s ribosomal protein yml8; Mitochondrial ribosomal protein of the large subunit
Top 10 interactors (score): MRPL9 (0.999); MRPL28 (0.999); RSM19 (0.999); MRPL23 (0.999); MRPL39 (0.999); MRPS28 (0.999); RTC6 (0.999); MRPL17 (0.999); MRPL22 (0.999); MRPL51 (0.999); RSM18 (0.999); RML2 (0.999); MRPL4 (0.999); MRPL24 (0.999); MRPS12 (0.999); IMG1 (0.999); MRPS5 (0.999); MRP7 (0.999); MRP4 (0.999); MRP20 (0.999)
Homologues (species, bitscore): MRPL17 (Homo sapiens, 58.2); Mrpl17 (Mus musculus, 51.2); mrpl17 (Danio rerio, 54.3); AT5G64650 (Arabidopsis thaliana, 83.2)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005304.1:298626-299342:- | gene-YJL063C_AKU4011 | rna-NM_001181496.1_AKU4011 | cds-NP_012472.1_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000190.1:315169-315885:+ | gene-YJL063C_BG1 | rna-NM_001181496.1_BG1 | cds-NP_012472.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005512.1:311160-311876:- | gene-YJL063C_Bruggeman | rna-NM_001181496.1_Bruggeman | cds-NP_012472.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005528.1:315271-315987:- | gene-YJL063C_CAT1 | rna-NM_001181496.1_CAT1 | cds-NP_012472.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005368.1:310280-310996:- | gene-YJL063C_CBS1585 | rna-NM_001181496.1_CBS1585 | cds-NP_012472.1_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005352.1:328291-329007:- | gene-YJL063C_CBS436 | rna-NM_001181496.1_CBS436 | cds-NP_012472.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005336.1:299384-300100:- | gene-YJL063C_CBS6412 | rna-NM_001181496.1_CBS6412 | cds-NP_012472.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005320.1:300733-301449:- | gene-YJL063C_CBS6413 | rna-NM_001181496.1_CBS6413 | cds-NP_012472.1_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001531.1:298227-298943:- | gene-YJL063C_CENPK1137D | rna-NM_001181496.1_CENPK1137D | cds-NP_012472.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005480.1:302464-303180:- | gene-YJL063C_EthanolRed | rna-NM_001181496.1_EthanolRed | cds-NP_012472.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005544.1:314039-314755:- | gene-YJL063C_FaliES1 | rna-NM_001181496.1_FaliES1 | cds-NP_012472.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000138.1:111621-112337:- | gene-YJL063C_JAY291 | rna-NM_001181496.1_JAY291 | cds-NP_012472.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005416.1:312316-313032:- | gene-YJL063C_MUCL30387 | rna-NM_001181496.1_MUCL30387 | cds-NP_012472.1_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005448.1:308354-309070:- | gene-YJL063C_MUCL30388 | rna-NM_001181496.1_MUCL30388 | cds-NP_012472.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005288.1:303036-303752:- | gene-YJL063C_MUCL39482 | rna-NM_001181496.1_MUCL39482 | cds-NP_012472.1_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005432.1:309680-310396:- | gene-YJL063C_MUCL42920 | rna-NM_001181496.1_MUCL42920 | cds-NP_012472.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011819.1:315738-316454:- | gene-YJL063C_NCIM3186 | rna-NM_001181496.1_NCIM3186 | cds-NP_012472.1_NCIM3186 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005272.1:301732-302448:- | gene-YJL063C_NCYC1407 | rna-NM_001181496.1_NCYC1407 | cds-NP_012472.1_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994149.1:314083-314799:- | gene-YJL063C_PE2H3 | rna-NM_001181496.1_PE2H3 | cds-NP_012472.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999881.1:313727-314443:- | gene-YJL063C_PE2H4 | rna-NM_001181496.1_PE2H4 | cds-NP_012472.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001142.9:315759-316475:- | gene-YJL063C_S288C | rna-NM_001181496.1_S288C | cds-NP_012472.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000003.1:111645-112361:- | gene-YJL063C_SA1 | rna-NM_001181496.1_SA1 | cds-NP_012472.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005496.1:307452-308168:- | gene-YJL063C_ThermosaccDry | rna-NM_001181496.1_ThermosaccDry | cds-NP_012472.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005464.1:309637-310353:- | gene-YJL063C_VR1 | rna-NM_001181496.1_VR1 | cds-NP_012472.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000021.1:288829-289545:- | gene-YJL063C_ZTW1 | rna-NM_001181496.1_ZTW1 | cds-NP_012472.1_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047496.1:312847-313563:- | gene-YJL063C_Sparadoxus | rna-NM_001181496.1_Sparadoxus | cds-NP_012472.1_Sparadoxus | 89.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |