Gene name: MRPL6
Reference locus (S288C): YHR147C
Gene biotype: protein_coding
Description: Mitochondrial 54s ribosomal protein yml16; Mitochondrial ribosomal protein of the large subunit
Top 10 interactors (score): MRPL9 (0.999); MRPS9 (0.998); MRPL8 (0.998); MRPL7 (0.997); MRPL10 (0.996); YML6 (0.994); MRPL24 (0.992); IMG1 (0.992); MRPS16 (0.99); RML2 (0.989); RSM10 (0.989); MRP7 (0.988); RSM19 (0.986); MRPS28 (0.984); MRPS5 (0.982); RTC6 (0.981); MRPL39 (0.981); MRPL22 (0.98); MRP17 (0.978); MRPL17 (0.978)
Homologues (species, bitscore): emb2394 (Arabidopsis thaliana, 103.2)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005302.1:379731-380375:- | gene-YHR147C_AKU4011 | rna-NM_001179278.1_AKU4011 | cds-NP_012017.1_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000141.1:137373-138017:+ | gene-YHR147C_BG1 | rna-NM_001179278.1_BG1 | cds-NP_012017.1_BG1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005510.1:386974-387618:- | gene-YHR147C_Bruggeman | rna-NM_001179278.1_Bruggeman | cds-NP_012017.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005526.1:382375-383019:- | gene-YHR147C_CAT1 | rna-NM_001179278.1_CAT1 | cds-NP_012017.1_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005366.1:379187-379831:- | gene-YHR147C_CBS1585 | rna-NM_001179278.1_CBS1585 | cds-NP_012017.1_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005350.1:376628-377272:- | gene-YHR147C_CBS436 | rna-NM_001179278.1_CBS436 | cds-NP_012017.1_CBS436 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005334.1:379627-380271:- | gene-YHR147C_CBS6412 | rna-NM_001179278.1_CBS6412 | cds-NP_012017.1_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005318.1:380068-380712:- | gene-YHR147C_CBS6413 | rna-NM_001179278.1_CBS6413 | cds-NP_012017.1_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001529.1:385812-386456:- | gene-YHR147C_CENPK1137D | rna-NM_001179278.1_CENPK1137D | cds-NP_012017.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005478.1:438268-438912:- | gene-YHR147C_EthanolRed | rna-NM_001179278.1_EthanolRed | cds-NP_012017.1_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005542.1:380711-381355:- | gene-YHR147C_FaliES1 | rna-NM_001179278.1_FaliES1 | cds-NP_012017.1_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000017.1:58486-59130:+ | gene-YHR147C_JAY291 | rna-NM_001179278.1_JAY291 | cds-NP_012017.1_JAY291 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005414.1:388055-388699:- | gene-YHR147C_MUCL30387 | rna-NM_001179278.1_MUCL30387 | cds-NP_012017.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005446.1:387495-388139:- | gene-YHR147C_MUCL30388 | rna-NM_001179278.1_MUCL30388 | cds-NP_012017.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005286.1:379098-379742:- | gene-YHR147C_MUCL39482 | rna-NM_001179278.1_MUCL39482 | cds-NP_012017.1_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005430.1:385647-386291:- | gene-YHR147C_MUCL42920 | rna-NM_001179278.1_MUCL42920 | cds-NP_012017.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011817.1:392521-393165:- | gene-YHR147C_NCIM3186 | rna-NM_001179278.1_NCIM3186 | cds-NP_012017.1_NCIM3186 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005270.1:381556-382200:- | gene-YHR147C_NCYC1407 | rna-NM_001179278.1_NCYC1407 | cds-NP_012017.1_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994147.1:380684-381328:- | gene-YHR147C_PE2H3 | rna-NM_001179278.1_PE2H3 | cds-NP_012017.1_PE2H3 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999879.1:388111-388755:- | gene-YHR147C_PE2H4 | rna-NM_001179278.1_PE2H4 | cds-NP_012017.1_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001140.6:392639-393283:- | gene-YHR147C_S288C | rna-NM_001179278.1_S288C | cds-NP_012017.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000070.1:58544-59188:+ | gene-YHR147C_SA1 | rna-NM_001179278.1_SA1 | cds-NP_012017.1_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005494.1:381794-382438:- | gene-YHR147C_ThermosaccDry | rna-NM_001179278.1_ThermosaccDry | cds-NP_012017.1_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005462.1:389606-390250:- | gene-YHR147C_VR1 | rna-NM_001179278.1_VR1 | cds-NP_012017.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000017.1:372037-372681:- | gene-YHR147C_ZTW1 | rna-NM_001179278.1_ZTW1 | cds-NP_012017.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047494.1:378158-378802:- | gene-YHR147C_Sparadoxus | rna-NM_001179278.1_Sparadoxus | cds-NP_012017.1_Sparadoxus | 91.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |