Gene name: MRPL44
Reference locus (S288C): YMR225C
Gene biotype: protein_coding
Description: Mitochondrial 54s ribosomal protein yml44; Mitochondrial ribosomal protein of the large subunit; protein abundance increases in response to DNA replication stress
Top 10 interactors (score): MRPL9 (0.939); MRPL37 (0.932); MRPL38 (0.905); MRPL1 (0.893); NAM9 (0.893); MRPS28 (0.892); MRPL4 (0.882); MRPL10 (0.877); MRP21 (0.868); RSM18 (0.867); MRPL28 (0.848); INH1 (0.814); MRPL36 (0.768); MRPL32 (0.766); PUF3 (0.763); MRPS16 (0.757); RTC6 (0.752); SWS2 (0.749); MRPS8 (0.749); MRP10 (0.744)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:760866-761309:- | gene-YMR225C_AKU4011 | rna-NM_001182732.1_AKU4011 | cds-NP_013952.1_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000069.1:193299-193742:+ | gene-YMR225C_BG1 | rna-NM_001182732.1_BG1 | cds-NP_013952.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005515.1:705093-705536:- | gene-YMR225C_Bruggeman | rna-NM_001182732.1_Bruggeman | cds-NP_013952.1_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005531.1:708968-709411:- | gene-YMR225C_CAT1 | rna-NM_001182732.1_CAT1 | cds-NP_013952.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005371.1:693126-693569:- | gene-YMR225C_CBS1585 | rna-NM_001182732.1_CBS1585 | cds-NP_013952.1_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005355.1:697395-697838:- | gene-YMR225C_CBS436 | rna-NM_001182732.1_CBS436 | cds-NP_013952.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:804688-805131:- | gene-YMR225C_CBS6412 | rna-NM_001182732.1_CBS6412 | cds-NP_013952.1_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005323.1:692278-692721:- | gene-YMR225C_CBS6413 | rna-NM_001182732.1_CBS6413 | cds-NP_013952.1_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001534.1:715703-716146:- | gene-YMR225C_CENPK1137D | rna-NM_001182732.1_CENPK1137D | cds-NP_013952.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:753332-753775:- | gene-YMR225C_EthanolRed | rna-NM_001182732.1_EthanolRed | cds-NP_013952.1_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005547.1:698984-699427:- | gene-YMR225C_FaliES1 | rna-NM_001182732.1_FaliES1 | cds-NP_013952.1_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000141.1:86608-87051:+ | gene-YMR225C_JAY291 | rna-NM_001182732.1_JAY291 | cds-NP_013952.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005419.1:698876-699319:- | gene-YMR225C_MUCL30387 | rna-NM_001182732.1_MUCL30387 | cds-NP_013952.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005451.1:706104-706547:- | gene-YMR225C_MUCL30388 | rna-NM_001182732.1_MUCL30388 | cds-NP_013952.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005291.1:694196-694639:- | gene-YMR225C_MUCL39482 | rna-NM_001182732.1_MUCL39482 | cds-NP_013952.1_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005435.1:701540-701983:- | gene-YMR225C_MUCL42920 | rna-NM_001182732.1_MUCL42920 | cds-NP_013952.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:720914-721357:- | gene-YMR225C_NCIM3186 | rna-NM_001182732.1_NCIM3186 | cds-NP_013952.1_NCIM3186 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005275.1:693853-694296:- | gene-YMR225C_NCYC1407 | rna-NM_001182732.1_NCYC1407 | cds-NP_013952.1_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994152.1:703715-704158:- | gene-YMR225C_PE2H3 | rna-NM_001182732.1_PE2H3 | cds-NP_013952.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:704733-705176:- | gene-YMR225C_PE2H4 | rna-NM_001182732.1_PE2H4 | cds-NP_013952.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:720960-721403:- | gene-YMR225C_S288C | rna-NM_001182732.1_S288C | cds-NP_013952.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000002.1:86723-87166:+ | gene-YMR225C_SA1 | rna-NM_001182732.1_SA1 | cds-NP_013952.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005499.1:695155-695598:- | gene-YMR225C_ThermosaccDry | rna-NM_001182732.1_ThermosaccDry | cds-NP_013952.1_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005467.1:708238-708681:- | gene-YMR225C_VR1 | rna-NM_001182732.1_VR1 | cds-NP_013952.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000028.1:110860-111303:- | gene-YMR225C_ZTW1 | rna-NM_001182732.1_ZTW1 | cds-NP_013952.1_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047499.1:713095-713540:- | gene-YMR225C_Sparadoxus | rna-NM_001182732.1_Sparadoxus | cds-NP_013952.1_Sparadoxus | 91.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |