Gene name: MRPL25
Reference locus (S288C): YGR076C
Gene biotype: protein_coding
Description: Mitochondrial 54s ribosomal protein yml25; Mitochondrial ribosomal protein of the large subunit; mutation confers increased replicative lifespan
Top 10 interactors (score): MRPL9 (0.986); MRPL40 (0.977); IMG1 (0.976); MRPS8 (0.975); MRPL24 (0.968); MRPL35 (0.967); MRPS16 (0.96); IMG2 (0.956); MRPL32 (0.955); MRPL36 (0.952); YNL122C (0.951); RSM26 (0.949); MRPL4 (0.947); MRP20 (0.945); MRPL23 (0.945); MRPL31 (0.944); MRPL7 (0.942); MRP21 (0.941); MRPL17 (0.94); SWS2 (0.938)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:620796-621269:- | gene-YGR076C_AKU4011 | rna-NM_001181205.1_AKU4011 | cds-NP_011590.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000173.1:57064-57537:- | gene-YGR076C_BG1 | rna-NM_001181205.1_BG1 | cds-NP_011590.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:623071-623544:- | gene-YGR076C_Bruggeman | rna-NM_001181205.1_Bruggeman | cds-NP_011590.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:621503-621976:- | gene-YGR076C_CAT1 | rna-NM_001181205.1_CAT1 | cds-NP_011590.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:622090-622563:- | gene-YGR076C_CBS1585 | rna-NM_001181205.1_CBS1585 | cds-NP_011590.1_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:623401-623874:- | gene-YGR076C_CBS436 | rna-NM_001181205.1_CBS436 | cds-NP_011590.1_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:614915-615388:- | gene-YGR076C_CBS6412 | rna-NM_001181205.1_CBS6412 | cds-NP_011590.1_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:618798-619271:- | gene-YGR076C_CBS6413 | rna-NM_001181205.1_CBS6413 | cds-NP_011590.1_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:636810-637283:- | gene-YGR076C_CENPK1137D | rna-NM_001181205.1_CENPK1137D | cds-NP_011590.1_CENPK1137D | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:609049-609522:- | gene-YGR076C_EthanolRed | rna-NM_001181205.1_EthanolRed | cds-NP_011590.1_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:612516-612989:- | gene-YGR076C_FaliES1 | rna-NM_001181205.1_FaliES1 | cds-NP_011590.1_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000435.1:63451-63924:- | gene-YGR076C_JAY291 | rna-NM_001181205.1_JAY291 | cds-NP_011590.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:619732-620205:- | gene-YGR076C_MUCL30387 | rna-NM_001181205.1_MUCL30387 | cds-NP_011590.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:623101-623574:- | gene-YGR076C_MUCL30388 | rna-NM_001181205.1_MUCL30388 | cds-NP_011590.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:617941-618414:- | gene-YGR076C_MUCL39482 | rna-NM_001181205.1_MUCL39482 | cds-NP_011590.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:627732-628205:- | gene-YGR076C_MUCL42920 | rna-NM_001181205.1_MUCL42920 | cds-NP_011590.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:637104-637577:- | gene-YGR076C_NCIM3186 | rna-NM_001181205.1_NCIM3186 | cds-NP_011590.1_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:612122-612595:- | gene-YGR076C_NCYC1407 | rna-NM_001181205.1_NCYC1407 | cds-NP_011590.1_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:615356-615829:- | gene-YGR076C_PE2H3 | rna-NM_001181205.1_PE2H3 | cds-NP_011590.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:620480-620953:- | gene-YGR076C_PE2H4 | rna-NM_001181205.1_PE2H4 | cds-NP_011590.1_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:637104-637577:- | gene-YGR076C_S288C | rna-NM_001181205.1_S288C | cds-NP_011590.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000015.1:63646-64119:- | gene-YGR076C_SA1 | rna-NM_001181205.1_SA1 | cds-NP_011590.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:631842-632315:- | gene-YGR076C_ThermosaccDry | rna-NM_001181205.1_ThermosaccDry | cds-NP_011590.1_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:728802-729275:- | gene-YGR076C_VR1 | rna-NM_001181205.1_VR1 | cds-NP_011590.1_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000015.1:87312-87785:- | gene-YGR076C_ZTW1 | rna-NM_001181205.1_ZTW1 | cds-NP_011590.1_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:622399-622872:- | gene-YGR076C_Sparadoxus | rna-NM_001181205.1_Sparadoxus | cds-NP_011590.1_Sparadoxus | 90.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |