Gene name: MRPL20
Reference locus (S288C): YKR085C
Gene biotype: protein_coding
Description: Mitochondrial 54s ribosomal protein yml20; Mitochondrial ribosomal protein of the large subunit
Top 10 interactors (score): MRPL8 (0.998); NAM9 (0.996); MRPL17 (0.995); MRPL4 (0.993); MRPL35 (0.991); IMG1 (0.989); RSM26 (0.988); MRPS9 (0.986); MRPL32 (0.985); MRPL16 (0.985); MRPL9 (0.984); MRPL7 (0.982); MRPL31 (0.981); MRPL38 (0.981); RSM7 (0.978); MRPS5 (0.978); RML2 (0.977); RSM23 (0.976); MRPS18 (0.976); MRPL40 (0.973)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005305.1:585125-585712:- | gene-YKR085C_AKU4011 | rna-NM_001179875.1_AKU4011 | cds-NP_013011.1_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000113.1:58513-59100:+ | gene-YKR085C_BG1 | rna-NM_001179875.1_BG1 | cds-NP_013011.1_BG1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005513.1:607703-608290:- | gene-YKR085C_Bruggeman | rna-NM_001179875.1_Bruggeman | cds-NP_013011.1_Bruggeman | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005529.1:603624-604211:- | gene-YKR085C_CAT1 | rna-NM_001179875.1_CAT1 | cds-NP_013011.1_CAT1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005369.1:597612-598199:- | gene-YKR085C_CBS1585 | rna-NM_001179875.1_CBS1585 | cds-NP_013011.1_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005353.1:595997-596584:- | gene-YKR085C_CBS436 | rna-NM_001179875.1_CBS436 | cds-NP_013011.1_CBS436 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005337.1:580900-581487:- | gene-YKR085C_CBS6412 | rna-NM_001179875.1_CBS6412 | cds-NP_013011.1_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005321.1:597430-598017:- | gene-YKR085C_CBS6413 | rna-NM_001179875.1_CBS6413 | cds-NP_013011.1_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001532.1:598749-599336:- | gene-YKR085C_CENPK1137D | rna-NM_001179875.1_CENPK1137D | cds-NP_013011.1_CENPK1137D | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005481.1:594936-595523:- | gene-YKR085C_EthanolRed | rna-NM_001179875.1_EthanolRed | cds-NP_013011.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005545.1:598831-599418:- | gene-YKR085C_FaliES1 | rna-NM_001179875.1_FaliES1 | cds-NP_013011.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000426.1:45515-46102:+ | gene-YKR085C_JAY291 | rna-NM_001179875.1_JAY291 | cds-NP_013011.1_JAY291 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005417.1:607198-607785:- | gene-YKR085C_MUCL30387 | rna-NM_001179875.1_MUCL30387 | cds-NP_013011.1_MUCL30387 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005449.1:601542-602129:- | gene-YKR085C_MUCL30388 | rna-NM_001179875.1_MUCL30388 | cds-NP_013011.1_MUCL30388 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005289.1:596453-597040:- | gene-YKR085C_MUCL39482 | rna-NM_001179875.1_MUCL39482 | cds-NP_013011.1_MUCL39482 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005433.1:602476-603063:- | gene-YKR085C_MUCL42920 | rna-NM_001179875.1_MUCL42920 | cds-NP_013011.1_MUCL42920 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011820.1:599083-599670:- | gene-YKR085C_NCIM3186 | rna-NM_001179875.1_NCIM3186 | cds-NP_013011.1_NCIM3186 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005273.1:596865-597452:- | gene-YKR085C_NCYC1407 | rna-NM_001179875.1_NCYC1407 | cds-NP_013011.1_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994150.1:622070-622657:- | gene-YKR085C_PE2H3 | rna-NM_001179875.1_PE2H3 | cds-NP_013011.1_PE2H3 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999882.1:606474-607061:- | gene-YKR085C_PE2H4 | rna-NM_001179875.1_PE2H4 | cds-NP_013011.1_PE2H4 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001143.9:599094-599681:- | gene-YKR085C_S288C | rna-NM_001179875.1_S288C | cds-NP_013011.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000029.1:82168-82755:+ | gene-YKR085C_SA1 | rna-NM_001179875.1_SA1 | cds-NP_013011.1_SA1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005497.1:598078-598665:- | gene-YKR085C_ThermosaccDry | rna-NM_001179875.1_ThermosaccDry | cds-NP_013011.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005465.1:597341-597928:- | gene-YKR085C_VR1 | rna-NM_001179875.1_VR1 | cds-NP_013011.1_VR1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000022.1:595059-595646:- | gene-YKR085C_ZTW1 | rna-NM_001179875.1_ZTW1 | cds-NP_013011.1_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047497.1:620309-620896:- | gene-YKR085C_Sparadoxus | rna-NM_001179875.1_Sparadoxus | cds-NP_013011.1_Sparadoxus | 90.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |