Gene name: MRPL17
Reference locus (S288C): YNL252C
Gene biotype: protein_coding
Description: Mitochondrial 54s ribosomal protein yml17/yml30; Mitochondrial ribosomal protein of the large subunit
Top 10 interactors (score): MRPS5 (0.999); MRP7 (0.999); MRPS28 (0.999); MRPL8 (0.999); MRP20 (0.999); MRPL32 (0.999); MRPL10 (0.999); MRPL22 (0.999); MRPL51 (0.999); YML6 (0.999); RSM23 (0.999); MRPS9 (0.999); RSM7 (0.999); MRPL23 (0.999); IMG1 (0.999); MRPL24 (0.999); RML2 (0.999); MRPL4 (0.999); MRPL9 (0.999); MRPL28 (0.999)
Homologues (species, bitscore): MRPL46 (Homo sapiens, 56.6); Mrpl46 (Mus musculus, 53.1); mrpl46 (Xenopus tropicalis, 50.1); DECOY (Arabidopsis thaliana, 72.8)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005308.1:165212-166063:- | gene-YNL252C_AKU4011 | rna-NM_001183090.1_AKU4011 | cds-NP_014147.1_AKU4011 | 98.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000155.1:69169-70014:- | gene-YNL252C_BG1 | rna-NM_001183090.1_BG1 | cds-NP_014147.1_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005516.1:175034-175879:- | gene-YNL252C_Bruggeman | rna-NM_001183090.1_Bruggeman | cds-NP_014147.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005532.1:182329-183174:- | gene-YNL252C_CAT1 | rna-NM_001183090.1_CAT1 | cds-NP_014147.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005372.1:165612-166463:- | gene-YNL252C_CBS1585 | rna-NM_001183090.1_CBS1585 | cds-NP_014147.1_CBS1585 | 98.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005356.1:160713-161558:- | gene-YNL252C_CBS436 | rna-NM_001183090.1_CBS436 | cds-NP_014147.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005340.1:162023-162874:- | gene-YNL252C_CBS6412 | rna-NM_001183090.1_CBS6412 | cds-NP_014147.1_CBS6412 | 98.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005324.1:162304-163149:- | gene-YNL252C_CBS6413 | rna-NM_001183090.1_CBS6413 | cds-NP_014147.1_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001535.1:165255-166100:- | gene-YNL252C_CENPK1137D | rna-NM_001183090.1_CENPK1137D | cds-NP_014147.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005484.1:162862-163707:- | gene-YNL252C_EthanolRed | rna-NM_001183090.1_EthanolRed | cds-NP_014147.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005548.1:157597-158442:- | gene-YNL252C_FaliES1 | rna-NM_001183090.1_FaliES1 | cds-NP_014147.1_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000082.1:68764-69609:- | gene-YNL252C_JAY291 | rna-NM_001183090.1_JAY291 | cds-NP_014147.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005420.1:170818-171663:- | gene-YNL252C_MUCL30387 | rna-NM_001183090.1_MUCL30387 | cds-NP_014147.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005452.1:169402-170247:- | gene-YNL252C_MUCL30388 | rna-NM_001183090.1_MUCL30388 | cds-NP_014147.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005292.1:163102-163953:- | gene-YNL252C_MUCL39482 | rna-NM_001183090.1_MUCL39482 | cds-NP_014147.1_MUCL39482 | 98.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005436.1:165369-166214:- | gene-YNL252C_MUCL42920 | rna-NM_001183090.1_MUCL42920 | cds-NP_014147.1_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011823.1:171410-172255:- | gene-YNL252C_NCIM3186 | rna-NM_001183090.1_NCIM3186 | cds-NP_014147.1_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005276.1:165206-166051:- | gene-YNL252C_NCYC1407 | rna-NM_001183090.1_NCYC1407 | cds-NP_014147.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994153.1:162107-162952:- | gene-YNL252C_PE2H3 | rna-NM_001183090.1_PE2H3 | cds-NP_014147.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999885.1:161495-162340:- | gene-YNL252C_PE2H4 | rna-NM_001183090.1_PE2H4 | cds-NP_014147.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001146.8:171441-172286:- | gene-YNL252C_S288C | rna-NM_001183090.1_S288C | cds-NP_014147.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000040.1:80004-80849:+ | gene-YNL252C_SA1 | rna-NM_001183090.1_SA1 | cds-NP_014147.1_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005500.1:158453-159298:- | gene-YNL252C_ThermosaccDry | rna-NM_001183090.1_ThermosaccDry | cds-NP_014147.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005468.1:177364-178209:- | gene-YNL252C_VR1 | rna-NM_001183090.1_VR1 | cds-NP_014147.1_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000030.1:68785-69636:- | gene-YNL252C_ZTW1 | rna-NM_001183090.1_ZTW1 | cds-NP_014147.1_ZTW1 | 98.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047500.1:168708-169553:- | gene-YNL252C_Sparadoxus | rna-NM_001183090.1_Sparadoxus | cds-NP_014147.1_Sparadoxus | 88.6 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |