Gene name: MRPL16
Reference locus (S288C): YBL038W
Gene biotype: protein_coding
Description: Mitochondrial ribosomal protein of the large subunit; homologous to bacterial L16 ribosomal protein; synthetic lethality with hac1 mutation suggests a possible role in synthesis of precursors for protein glycosylation
Top 10 interactors (score): MRPL8 (0.999); MRPS16 (0.999); YML6 (0.999); MRPL10 (0.999); RTC6 (0.999); MRPL23 (0.999); MRPL9 (0.999); MRPL28 (0.999); RSM18 (0.999); MRPL51 (0.999); MRP7 (0.999); MRPS12 (0.999); IMG1 (0.999); MRPS5 (0.999); RML2 (0.999); MRPL4 (0.999); MRP17 (0.998); MRPS9 (0.998); RSM7 (0.998); MRPL32 (0.998)
Homologues (species, bitscore): AtCg00790 (Arabidopsis thaliana, 73.2)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005296.1:139804-140502:+ | gene-YBL038W_AKU4011 | rna-NM_001178278.1_AKU4011 | cds-NP_009515.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000179.1:130614-131312:+ | gene-YBL038W_BG1 | rna-NM_001178278.1_BG1 | cds-NP_009515.1_BG1 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005504.1:140383-141081:+ | gene-YBL038W_Bruggeman | rna-NM_001178278.1_Bruggeman | cds-NP_009515.1_Bruggeman | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005520.1:143010-143708:+ | gene-YBL038W_CAT1 | rna-NM_001178278.1_CAT1 | cds-NP_009515.1_CAT1 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005360.1:132343-133041:+ | gene-YBL038W_CBS1585 | rna-NM_001178278.1_CBS1585 | cds-NP_009515.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005344.1:140845-141543:+ | gene-YBL038W_CBS436 | rna-NM_001178278.1_CBS436 | cds-NP_009515.1_CBS436 | 98.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005328.1:231097-231795:+ | gene-YBL038W_CBS6412 | rna-NM_001178278.1_CBS6412 | cds-NP_009515.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005312.1:137914-138612:+ | gene-YBL038W_CBS6413 | rna-NM_001178278.1_CBS6413 | cds-NP_009515.1_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001523.1:139938-140636:+ | gene-YBL038W_CENPK1137D | rna-NM_001178278.1_CENPK1137D | cds-NP_009515.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005472.1:153764-154462:+ | gene-YBL038W_EthanolRed | rna-NM_001178278.1_EthanolRed | cds-NP_009515.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005536.1:154611-155309:+ | gene-YBL038W_FaliES1 | rna-NM_001178278.1_FaliES1 | cds-NP_009515.1_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000072.1:57238-57936:+ | gene-YBL038W_JAY291 | rna-NM_001178278.1_JAY291 | cds-NP_009515.1_JAY291 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005408.1:139759-140457:+ | gene-YBL038W_MUCL30387 | rna-NM_001178278.1_MUCL30387 | cds-NP_009515.1_MUCL30387 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005440.1:141033-141731:+ | gene-YBL038W_MUCL30388 | rna-NM_001178278.1_MUCL30388 | cds-NP_009515.1_MUCL30388 | 98.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005280.1:132518-133216:+ | gene-YBL038W_MUCL39482 | rna-NM_001178278.1_MUCL39482 | cds-NP_009515.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005424.1:139344-140042:+ | gene-YBL038W_MUCL42920 | rna-NM_001178278.1_MUCL42920 | cds-NP_009515.1_MUCL42920 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011811.1:145984-146682:+ | gene-YBL038W_NCIM3186 | rna-NM_001178278.1_NCIM3186 | cds-NP_009515.1_NCIM3186 | 98.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005264.1:133655-134353:+ | gene-YBL038W_NCYC1407 | rna-NM_001178278.1_NCYC1407 | cds-NP_009515.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994141.1:139915-140613:+ | gene-YBL038W_PE2H3 | rna-NM_001178278.1_PE2H3 | cds-NP_009515.1_PE2H3 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999873.1:137559-138257:+ | gene-YBL038W_PE2H4 | rna-NM_001178278.1_PE2H4 | cds-NP_009515.1_PE2H4 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001134.8:146187-146885:+ | gene-YBL038W_S288C | rna-NM_001178278.1_S288C | cds-NP_009515.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000051.1:30766-31464:+ | gene-YBL038W_SA1 | rna-NM_001178278.1_SA1 | cds-NP_009515.1_SA1 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005488.1:154564-155262:+ | gene-YBL038W_ThermosaccDry | rna-NM_001178278.1_ThermosaccDry | cds-NP_009515.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005456.1:136744-137442:+ | gene-YBL038W_VR1 | rna-NM_001178278.1_VR1 | cds-NP_009515.1_VR1 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000003.1:131279-131977:+ | gene-YBL038W_ZTW1 | rna-NM_001178278.1_ZTW1 | cds-NP_009515.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047488.1:166159-166857:+ | gene-YBL038W_Sparadoxus | rna-NM_001178278.1_Sparadoxus | cds-NP_009515.1_Sparadoxus | 89.7 | 99.1 | Verified | 1 | 1 | 1 | False | True | False | False | False |