Gene name: MRPL13
Reference locus (S288C): YKR006C
Gene biotype: protein_coding
Description: Mitochondrial 54s ribosomal protein yml13; Mitochondrial ribosomal protein of the large subunit; not essential for mitochondrial translation
Top 10 interactors (score): MRPL9 (0.976); MRPL36 (0.966); MRP20 (0.956); IMG1 (0.956); MRP7 (0.954); MRPL40 (0.949); YML6 (0.946); MRPL6 (0.939); MRPL32 (0.936); MRPL4 (0.932); MRPL8 (0.929); MRPL22 (0.925); MRPL33 (0.925); MRPL35 (0.924); MRPL3 (0.923); MRPL23 (0.921); RSM23 (0.918); MRPL16 (0.917); RML2 (0.916); MRP51 (0.912)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005305.1:436427-437221:- | gene-YKR006C_AKU4011 | rna-NM_001179796.3_AKU4011 | cds-NP_012931.4_AKU4011 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000113.1:206688-207482:+ | gene-YKR006C_BG1 | rna-NM_001179796.3_BG1 | cds-NP_012931.4_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005513.1:458130-458924:- | gene-YKR006C_Bruggeman | rna-NM_001179796.3_Bruggeman | cds-NP_012931.4_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005529.1:453235-454029:- | gene-YKR006C_CAT1 | rna-NM_001179796.3_CAT1 | cds-NP_012931.4_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005369.1:449167-449961:- | gene-YKR006C_CBS1585 | rna-NM_001179796.3_CBS1585 | cds-NP_012931.4_CBS1585 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005353.1:448004-448798:- | gene-YKR006C_CBS436 | rna-NM_001179796.3_CBS436 | cds-NP_012931.4_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005337.1:433325-434119:- | gene-YKR006C_CBS6412 | rna-NM_001179796.3_CBS6412 | cds-NP_012931.4_CBS6412 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005321.1:448999-449793:- | gene-YKR006C_CBS6413 | rna-NM_001179796.3_CBS6413 | cds-NP_012931.4_CBS6413 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001532.1:450100-450894:- | gene-YKR006C_CENPK1137D | rna-NM_001179796.3_CENPK1137D | cds-NP_012931.4_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005481.1:446908-447702:- | gene-YKR006C_EthanolRed | rna-NM_001179796.3_EthanolRed | cds-NP_012931.4_EthanolRed | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005545.1:448997-449791:- | gene-YKR006C_FaliES1 | rna-NM_001179796.3_FaliES1 | cds-NP_012931.4_FaliES1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000120.1:7016-7810:+ | gene-YKR006C_JAY291 | rna-NM_001179796.3_JAY291 | cds-NP_012931.4_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005417.1:457444-458238:- | gene-YKR006C_MUCL30387 | rna-NM_001179796.3_MUCL30387 | cds-NP_012931.4_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005449.1:453055-453849:- | gene-YKR006C_MUCL30388 | rna-NM_001179796.3_MUCL30388 | cds-NP_012931.4_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005289.1:448484-449278:- | gene-YKR006C_MUCL39482 | rna-NM_001179796.3_MUCL39482 | cds-NP_012931.4_MUCL39482 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005433.1:454289-455083:- | gene-YKR006C_MUCL42920 | rna-NM_001179796.3_MUCL42920 | cds-NP_012931.4_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011820.1:450412-451206:- | gene-YKR006C_NCIM3186 | rna-NM_001179796.3_NCIM3186 | cds-NP_012931.4_NCIM3186 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005273.1:448692-449486:- | gene-YKR006C_NCYC1407 | rna-NM_001179796.3_NCYC1407 | cds-NP_012931.4_NCYC1407 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994150.1:473342-474136:- | gene-YKR006C_PE2H3 | rna-NM_001179796.3_PE2H3 | cds-NP_012931.4_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999882.1:458084-458878:- | gene-YKR006C_PE2H4 | rna-NM_001179796.3_PE2H4 | cds-NP_012931.4_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001143.9:450423-451217:- | gene-YKR006C_S288C | rna-NM_001179796.3_S288C | cds-NP_012931.4_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000027.1:128686-129480:- | gene-YKR006C_SA1 | rna-NM_001179796.3_SA1 | cds-NP_012931.4_SA1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005497.1:449095-449889:- | gene-YKR006C_ThermosaccDry | rna-NM_001179796.3_ThermosaccDry | cds-NP_012931.4_ThermosaccDry | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005465.1:448365-449159:- | gene-YKR006C_VR1 | rna-NM_001179796.3_VR1 | cds-NP_012931.4_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000022.1:447133-447927:- | gene-YKR006C_ZTW1 | rna-NM_001179796.3_ZTW1 | cds-NP_012931.4_ZTW1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047497.1:472076-472870:- | gene-YKR006C_Sparadoxus | rna-NM_001179796.3_Sparadoxus | cds-NP_012931.4_Sparadoxus | 88.5 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |