MRP8 (YKL142W)


Gene profile

Gene name: MRP8
Reference locus (S288C): YKL142W
Gene biotype: protein_coding

Description: Uncharacterized protein MRP8; Protein of unknown function; undergoes sumoylation; transcription induced under cell wall stress; protein levels are reduced under anaerobic conditions; protein abundance increases in response to DNA replication stress; originally thought to be a mitochondrial ribosomal protein based on sequence analysis

Top 10 interactors (score): PIL1 (0.977); LSP1 (0.97); PNC1 (0.813); DCS1 (0.769); MRPL10 (0.746); STF2 (0.733); BOP3 (0.693); RSM10 (0.679); EIS1 (0.649); TFS1 (0.621); YLR345W (0.609); YKL091C (0.598); TMA10 (0.591); RPC25 (0.59); GAD1 (0.589); RTC3 (0.558); MCR1 (0.552); TOA1 (0.55); HSP42 (0.54); RNY1 (0.528)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005305.1:165393-166052:+ gene-YKL142W_AKU4011 rna-NM_001179708.1_AKU4011 cds-NP_012780.1_AKU4011 99.5 100.0 Verified 1 1 1 True True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000030.1:142525-143184:+ gene-YKL142W_BG1 rna-NM_001179708.1_BG1 cds-NP_012780.1_BG1 100.0 100.0 Verified 1 1 1 True True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005513.1:183054-183713:+ gene-YKL142W_Bruggeman rna-NM_001179708.1_Bruggeman cds-NP_012780.1_Bruggeman 99.6 100.0 Verified 1 1 1 True True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005529.1:178379-179038:+ gene-YKL142W_CAT1 rna-NM_001179708.1_CAT1 cds-NP_012780.1_CAT1 100.0 100.0 Verified 1 1 1 True True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005369.1:177624-178283:+ gene-YKL142W_CBS1585 rna-NM_001179708.1_CBS1585 cds-NP_012780.1_CBS1585 99.3 100.0 Verified 1 1 1 True True False False False
CBS436 GCA_001738355.1 Sake Asia CM005353.1:176224-176883:+ gene-YKL142W_CBS436 rna-NM_001179708.1_CBS436 cds-NP_012780.1_CBS436 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005337.1:162638-163297:+ gene-YKL142W_CBS6412 rna-NM_001179708.1_CBS6412 cds-NP_012780.1_CBS6412 99.5 100.0 Mismatch 1 1 1 True True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005321.1:178088-178747:+ gene-YKL142W_CBS6413 rna-NM_001179708.1_CBS6413 cds-NP_012780.1_CBS6413 99.5 100.0 Verified 1 1 1 True True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001532.1:178159-178818:+ gene-YKL142W_CENPK1137D rna-NM_001179708.1_CENPK1137D cds-NP_012780.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005481.1:176127-176786:+ gene-YKL142W_EthanolRed rna-NM_001179708.1_EthanolRed cds-NP_012780.1_EthanolRed 99.6 100.0 Verified 1 1 1 True True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005545.1:176939-177598:+ gene-YKL142W_FaliES1 rna-NM_001179708.1_FaliES1 cds-NP_012780.1_FaliES1 99.6 100.0 Verified 1 1 1 True True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000198.1:13652-14311:+ gene-YKL142W_JAY291 rna-NM_001179708.1_JAY291 cds-NP_012780.1_JAY291 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005417.1:185151-185810:+ gene-YKL142W_MUCL30387 rna-NM_001179708.1_MUCL30387 cds-NP_012780.1_MUCL30387 99.6 100.0 Verified 1 1 1 True True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005449.1:179503-180162:+ gene-YKL142W_MUCL30388 rna-NM_001179708.1_MUCL30388 cds-NP_012780.1_MUCL30388 99.6 100.0 Verified 1 1 1 True True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005289.1:177425-178084:+ gene-YKL142W_MUCL39482 rna-NM_001179708.1_MUCL39482 cds-NP_012780.1_MUCL39482 99.6 100.0 Verified 1 1 1 True True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005433.1:181814-182473:+ gene-YKL142W_MUCL42920 rna-NM_001179708.1_MUCL42920 cds-NP_012780.1_MUCL42920 99.8 100.0 Verified 1 1 1 True True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011820.1:178504-179163:+ gene-YKL142W_NCIM3186 rna-NM_001179708.1_NCIM3186 cds-NP_012780.1_NCIM3186 99.6 100.0 Verified 1 1 1 True True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005273.1:177615-178274:+ gene-YKL142W_NCYC1407 rna-NM_001179708.1_NCYC1407 cds-NP_012780.1_NCYC1407 99.5 100.0 Verified 1 1 1 True True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994150.1:184712-185371:+ gene-YKL142W_PE2H3 rna-NM_001179708.1_PE2H3 cds-NP_012780.1_PE2H3 100.0 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999882.1:181006-181665:+ gene-YKL142W_PE2H4 rna-NM_001179708.1_PE2H4 cds-NP_012780.1_PE2H4 100.0 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001143.9:178515-179174:+ gene-YKL142W_S288C rna-NM_001179708.1_S288C cds-NP_012780.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000008.1:94937-95596:+ gene-YKL142W_SA1 rna-NM_001179708.1_SA1 cds-NP_012780.1_SA1 99.8 100.0 Verified 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005497.1:177639-178298:+ gene-YKL142W_ThermosaccDry rna-NM_001179708.1_ThermosaccDry cds-NP_012780.1_ThermosaccDry 99.6 100.0 Verified 1 1 1 True True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005465.1:176990-177649:+ gene-YKL142W_VR1 rna-NM_001179708.1_VR1 cds-NP_012780.1_VR1 100.0 100.0 Verified 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000022.1:176171-176830:+ gene-YKL142W_ZTW1 rna-NM_001179708.1_ZTW1 cds-NP_012780.1_ZTW1 99.6 100.0 Verified 1 1 1 True True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047497.1:192875-193534:+ gene-YKL142W_Sparadoxus rna-NM_001179708.1_Sparadoxus cds-NP_012780.1_Sparadoxus 90.3 100.0 Verified 1 1 1 False True False False False

Additional files