Gene name: MRP49
Reference locus (S288C): YKL167C
Gene biotype: protein_coding
Description: 54S ribosomal protein MRP49, mitochondrial; Mitochondrial ribosomal protein of the large subunit; not essential for mitochondrial translation
Top 10 interactors (score): MRP20 (0.876); MRPL36 (0.838); AIM34 (0.813); PUF3 (0.772); RTC6 (0.764); MRPL50 (0.76); MRPL32 (0.74); MRPL9 (0.739); MRPL13 (0.7); MRPL40 (0.689); MRPL39 (0.683); MRH4 (0.679); AIM24 (0.678); MRP7 (0.677); YLH47 (0.675); MRPL22 (0.668); YML6 (0.661); MRPL16 (0.648); FMC1 (0.64); COA1 (0.64)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005305.1:120582-120995:- | gene-YKL167C_AKU4011 | rna-NM_001179733.1_AKU4011 | cds-NP_012754.1_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000030.1:97131-97544:- | gene-YKL167C_BG1 | rna-NM_001179733.1_BG1 | cds-NP_012754.1_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005513.1:137984-138397:- | gene-YKL167C_Bruggeman | rna-NM_001179733.1_Bruggeman | cds-NP_012754.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005529.1:132926-133339:- | gene-YKL167C_CAT1 | rna-NM_001179733.1_CAT1 | cds-NP_012754.1_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005369.1:132566-132979:- | gene-YKL167C_CBS1585 | rna-NM_001179733.1_CBS1585 | cds-NP_012754.1_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005353.1:131322-131735:- | gene-YKL167C_CBS436 | rna-NM_001179733.1_CBS436 | cds-NP_012754.1_CBS436 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005337.1:118156-118569:- | gene-YKL167C_CBS6412 | rna-NM_001179733.1_CBS6412 | cds-NP_012754.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005321.1:133282-133695:- | gene-YKL167C_CBS6413 | rna-NM_001179733.1_CBS6413 | cds-NP_012754.1_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001532.1:133547-133960:- | gene-YKL167C_CENPK1137D | rna-NM_001179733.1_CENPK1137D | cds-NP_012754.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005481.1:131486-131899:- | gene-YKL167C_EthanolRed | rna-NM_001179733.1_EthanolRed | cds-NP_012754.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005545.1:132187-132600:- | gene-YKL167C_FaliES1 | rna-NM_001179733.1_FaliES1 | cds-NP_012754.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000006.2:131145-131558:- | gene-YKL167C_JAY291 | rna-NM_001179733.1_JAY291 | cds-NP_012754.1_JAY291 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005417.1:140272-140685:- | gene-YKL167C_MUCL30387 | rna-NM_001179733.1_MUCL30387 | cds-NP_012754.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005449.1:134628-135041:- | gene-YKL167C_MUCL30388 | rna-NM_001179733.1_MUCL30388 | cds-NP_012754.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005289.1:132621-133034:- | gene-YKL167C_MUCL39482 | rna-NM_001179733.1_MUCL39482 | cds-NP_012754.1_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005433.1:136947-137360:- | gene-YKL167C_MUCL42920 | rna-NM_001179733.1_MUCL42920 | cds-NP_012754.1_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011820.1:133710-134123:- | gene-YKL167C_NCIM3186 | rna-NM_001179733.1_NCIM3186 | cds-NP_012754.1_NCIM3186 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005273.1:132645-133058:- | gene-YKL167C_NCYC1407 | rna-NM_001179733.1_NCYC1407 | cds-NP_012754.1_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994150.1:139697-140110:- | gene-YKL167C_PE2H3 | rna-NM_001179733.1_PE2H3 | cds-NP_012754.1_PE2H3 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999882.1:135991-136404:- | gene-YKL167C_PE2H4 | rna-NM_001179733.1_PE2H4 | cds-NP_012754.1_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001143.9:133721-134134:- | gene-YKL167C_S288C | rna-NM_001179733.1_S288C | cds-NP_012754.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000008.1:49921-50334:- | gene-YKL167C_SA1 | rna-NM_001179733.1_SA1 | cds-NP_012754.1_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005497.1:132887-133300:- | gene-YKL167C_ThermosaccDry | rna-NM_001179733.1_ThermosaccDry | cds-NP_012754.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005465.1:131402-131815:- | gene-YKL167C_VR1 | rna-NM_001179733.1_VR1 | cds-NP_012754.1_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000022.1:131276-131689:- | gene-YKL167C_ZTW1 | rna-NM_001179733.1_ZTW1 | cds-NP_012754.1_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047497.1:145840-146253:- | gene-YKL167C_Sparadoxus | rna-NM_001179733.1_Sparadoxus | cds-NP_012754.1_Sparadoxus | 90.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |