Gene name: MRP4
Reference locus (S288C): YHL004W
Gene biotype: protein_coding
Description: 37S ribosomal protein MRP4, mitochondrial; Mitochondrial ribosomal protein of the small subunit
Top 10 interactors (score): MRP17 (0.999); RSM7 (0.999); RSM23 (0.999); MRPS16 (0.999); RSM19 (0.999); MRPS17 (0.999); MRPL9 (0.999); MRPS28 (0.999); RTC6 (0.999); MRPL51 (0.999); MRP2 (0.999); RSM24 (0.999); MRPL22 (0.999); RSM18 (0.999); MRPS12 (0.999); IMG1 (0.999); MRPS5 (0.999); RSM10 (0.999); MRPL8 (0.999); MRP7 (0.999)
Homologues (species, bitscore): MRPS2 (Homo sapiens, 99.8); Mrps2 (Mus musculus, 100.9); mrps2 (Danio rerio, 98.6); mrps2 (Xenopus tropicalis, 87.0); mRpS2 (Drosophila melanogaster, 91.7); mrps-2 (Caenorhabditis elegans, 102.8); rps2 (Arabidopsis thaliana, 114.0)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005302.1:87833-89017:+ | gene-YHL004W_AKU4011 | rna-NM_001179084.1_AKU4011 | cds-NP_011859.1_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000053.1:7537-8721:+ | gene-YHL004W_BG1 | rna-NM_001179084.1_BG1 | cds-NP_011859.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005510.1:94689-95873:+ | gene-YHL004W_Bruggeman | rna-NM_001179084.1_Bruggeman | cds-NP_011859.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005526.1:88663-89847:+ | gene-YHL004W_CAT1 | rna-NM_001179084.1_CAT1 | cds-NP_011859.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005366.1:88420-89604:+ | gene-YHL004W_CBS1585 | rna-NM_001179084.1_CBS1585 | cds-NP_011859.1_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005350.1:80910-82094:+ | gene-YHL004W_CBS436 | rna-NM_001179084.1_CBS436 | cds-NP_011859.1_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005334.1:88019-89203:+ | gene-YHL004W_CBS6412 | rna-NM_001179084.1_CBS6412 | cds-NP_011859.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005318.1:87741-88925:+ | gene-YHL004W_CBS6413 | rna-NM_001179084.1_CBS6413 | cds-NP_011859.1_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001529.1:92380-93564:+ | gene-YHL004W_CENPK1137D | rna-NM_001179084.1_CENPK1137D | cds-NP_011859.1_CENPK1137D | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005478.1:87828-89012:+ | gene-YHL004W_EthanolRed | rna-NM_001179084.1_EthanolRed | cds-NP_011859.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005542.1:88357-89541:+ | gene-YHL004W_FaliES1 | rna-NM_001179084.1_FaliES1 | cds-NP_011859.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000422.1:4443-5627:- | gene-YHL004W_JAY291 | rna-NM_001179084.1_JAY291 | cds-NP_011859.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005414.1:91429-92613:+ | gene-YHL004W_MUCL30387 | rna-NM_001179084.1_MUCL30387 | cds-NP_011859.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005446.1:92639-93823:+ | gene-YHL004W_MUCL30388 | rna-NM_001179084.1_MUCL30388 | cds-NP_011859.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005286.1:87446-88630:+ | gene-YHL004W_MUCL39482 | rna-NM_001179084.1_MUCL39482 | cds-NP_011859.1_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005430.1:91343-92527:+ | gene-YHL004W_MUCL42920 | rna-NM_001179084.1_MUCL42920 | cds-NP_011859.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011817.1:99101-100285:+ | gene-YHL004W_NCIM3186 | rna-NM_001179084.1_NCIM3186 | cds-NP_011859.1_NCIM3186 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005270.1:86862-88046:+ | gene-YHL004W_NCYC1407 | rna-NM_001179084.1_NCYC1407 | cds-NP_011859.1_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994147.1:89056-90240:+ | gene-YHL004W_PE2H3 | rna-NM_001179084.1_PE2H3 | cds-NP_011859.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999879.1:96497-97681:+ | gene-YHL004W_PE2H4 | rna-NM_001179084.1_PE2H4 | cds-NP_011859.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001140.6:99219-100403:+ | gene-YHL004W_S288C | rna-NM_001179084.1_S288C | cds-NP_011859.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000075.1:46150-47334:- | gene-YHL004W_SA1 | rna-NM_001179084.1_SA1 | cds-NP_011859.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005494.1:89447-90631:+ | gene-YHL004W_ThermosaccDry | rna-NM_001179084.1_ThermosaccDry | cds-NP_011859.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005462.1:94983-96167:+ | gene-YHL004W_VR1 | rna-NM_001179084.1_VR1 | cds-NP_011859.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000017.1:80612-81796:+ | gene-YHL004W_ZTW1 | rna-NM_001179084.1_ZTW1 | cds-NP_011859.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047494.1:87129-88316:+ | gene-YHL004W_Sparadoxus | rna-NM_001179084.1_Sparadoxus | cds-NP_011859.1_Sparadoxus | 89.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |