Gene name: MRP20
Reference locus (S288C): YDR405W
Gene biotype: protein_coding
Description: Mitochondrial 54s ribosomal protein yml41; Mitochondrial ribosomal protein of the large subunit
Top 10 interactors (score): MRPL4 (0.999); MRPL9 (0.999); MRPS9 (0.999); MRPS16 (0.999); RSM23 (0.999); RSM18 (0.999); MRPL17 (0.999); MRPL10 (0.999); MRPL27 (0.999); MRPL32 (0.999); MRPL8 (0.999); MRPL37 (0.999); MRP7 (0.999); IMG1 (0.999); MRP17 (0.998); YML6 (0.998); MRPL51 (0.998); MRPL22 (0.998); MRPS28 (0.998); MRPS12 (0.998)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:1217791-1218582:+ | gene-YDR405W_AKU4011 | rna-NM_001180713.3_AKU4011 | cds-NP_010693.3_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000039.1:96275-97066:+ | gene-YDR405W_BG1 | rna-NM_001180713.3_BG1 | cds-NP_010693.3_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:1248676-1249467:+ | gene-YDR405W_Bruggeman | rna-NM_001180713.3_Bruggeman | cds-NP_010693.3_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:1227233-1228024:+ | gene-YDR405W_CAT1 | rna-NM_001180713.3_CAT1 | cds-NP_010693.3_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:1212711-1213502:+ | gene-YDR405W_CBS1585 | rna-NM_001180713.3_CBS1585 | cds-NP_010693.3_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:1231578-1232369:+ | gene-YDR405W_CBS436 | rna-NM_001180713.3_CBS436 | cds-NP_010693.3_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:1208765-1209556:+ | gene-YDR405W_CBS6412 | rna-NM_001180713.3_CBS6412 | cds-NP_010693.3_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:1230620-1231411:+ | gene-YDR405W_CBS6413 | rna-NM_001180713.3_CBS6413 | cds-NP_010693.3_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:1276306-1277097:+ | gene-YDR405W_CENPK1137D | rna-NM_001180713.3_CENPK1137D | cds-NP_010693.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:1222197-1222988:+ | gene-YDR405W_EthanolRed | rna-NM_001180713.3_EthanolRed | cds-NP_010693.3_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:1225507-1226298:+ | gene-YDR405W_FaliES1 | rna-NM_001180713.3_FaliES1 | cds-NP_010693.3_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000181.1:29234-30025:- | gene-YDR405W_JAY291 | rna-NM_001180713.3_JAY291 | cds-NP_010693.3_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:1232238-1233029:+ | gene-YDR405W_MUCL30387 | rna-NM_001180713.3_MUCL30387 | cds-NP_010693.3_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:1214344-1215135:+ | gene-YDR405W_MUCL30388 | rna-NM_001180713.3_MUCL30388 | cds-NP_010693.3_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:1204039-1204830:+ | gene-YDR405W_MUCL39482 | rna-NM_001180713.3_MUCL39482 | cds-NP_010693.3_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:1146477-1147268:+ | gene-YDR405W_MUCL42920 | rna-NM_001180713.3_MUCL42920 | cds-NP_010693.3_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:1277569-1278360:+ | gene-YDR405W_NCIM3186 | rna-NM_001180713.3_NCIM3186 | cds-NP_010693.3_NCIM3186 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:1218011-1218802:+ | gene-YDR405W_NCYC1407 | rna-NM_001180713.3_NCYC1407 | cds-NP_010693.3_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:1228144-1228935:+ | gene-YDR405W_PE2H3 | rna-NM_001180713.3_PE2H3 | cds-NP_010693.3_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:1233712-1234503:+ | gene-YDR405W_PE2H4 | rna-NM_001180713.3_PE2H4 | cds-NP_010693.3_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:1277646-1278437:+ | gene-YDR405W_S288C | rna-NM_001180713.3_S288C | cds-NP_010693.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000071.1:29351-30142:- | gene-YDR405W_SA1 | rna-NM_001180713.3_SA1 | cds-NP_010693.3_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:1229769-1230560:+ | gene-YDR405W_ThermosaccDry | rna-NM_001180713.3_ThermosaccDry | cds-NP_010693.3_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:1244951-1245742:+ | gene-YDR405W_VR1 | rna-NM_001180713.3_VR1 | cds-NP_010693.3_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000008.1:272570-273361:+ | gene-YDR405W_ZTW1 | rna-NM_001180713.3_ZTW1 | cds-NP_010693.3_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:1224962-1225753:+ | gene-YDR405W_Sparadoxus | rna-NM_001180713.3_Sparadoxus | cds-NP_010693.3_Sparadoxus | 89.2 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |