Gene name: MRP17
Reference locus (S288C): YKL003C
Gene biotype: protein_coding
Description: 37S ribosomal protein MRP17, mitochondrial; Mitochondrial ribosomal protein of the small subunit; MRP17 exhibits genetic interactions with PET122, encoding a COX3-specific translational activator
Top 10 interactors (score): MRPL9 (0.999); RSM10 (0.999); MRPS17 (0.999); MRPS5 (0.999); IMG1 (0.999); MRP10 (0.999); RSM19 (0.999); MRPS12 (0.999); MRP7 (0.999); MRPL39 (0.999); RTC6 (0.999); MRPL8 (0.999); MRP4 (0.999); MRPS28 (0.999); MRPS9 (0.999); RSM7 (0.999); RSM18 (0.999); RSM23 (0.999); RSM27 (0.999); MRPS16 (0.999)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005305.1:423114-423509:- | gene-YKL003C_AKU4011 | rna-NM_001179569.3_AKU4011 | cds-NP_012923.3_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000113.1:220411-220806:+ | gene-YKL003C_BG1 | rna-NM_001179569.3_BG1 | cds-NP_012923.3_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005513.1:444804-445199:- | gene-YKL003C_Bruggeman | rna-NM_001179569.3_Bruggeman | cds-NP_012923.3_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005529.1:439910-440305:- | gene-YKL003C_CAT1 | rna-NM_001179569.3_CAT1 | cds-NP_012923.3_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005369.1:435832-436227:- | gene-YKL003C_CBS1585 | rna-NM_001179569.3_CBS1585 | cds-NP_012923.3_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005353.1:434679-435074:- | gene-YKL003C_CBS436 | rna-NM_001179569.3_CBS436 | cds-NP_012923.3_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005337.1:419990-420385:- | gene-YKL003C_CBS6412 | rna-NM_001179569.3_CBS6412 | cds-NP_012923.3_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005321.1:435687-436082:- | gene-YKL003C_CBS6413 | rna-NM_001179569.3_CBS6413 | cds-NP_012923.3_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001532.1:436774-437169:- | gene-YKL003C_CENPK1137D | rna-NM_001179569.3_CENPK1137D | cds-NP_012923.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005481.1:433595-433990:- | gene-YKL003C_EthanolRed | rna-NM_001179569.3_EthanolRed | cds-NP_012923.3_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005545.1:435685-436080:- | gene-YKL003C_FaliES1 | rna-NM_001179569.3_FaliES1 | cds-NP_012923.3_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000120.1:20740-21135:+ | gene-YKL003C_JAY291 | rna-NM_001179569.3_JAY291 | cds-NP_012923.3_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005417.1:444119-444514:- | gene-YKL003C_MUCL30387 | rna-NM_001179569.3_MUCL30387 | cds-NP_012923.3_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005449.1:439729-440124:- | gene-YKL003C_MUCL30388 | rna-NM_001179569.3_MUCL30388 | cds-NP_012923.3_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005289.1:435149-435544:- | gene-YKL003C_MUCL39482 | rna-NM_001179569.3_MUCL39482 | cds-NP_012923.3_MUCL39482 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005433.1:440963-441358:- | gene-YKL003C_MUCL42920 | rna-NM_001179569.3_MUCL42920 | cds-NP_012923.3_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011820.1:437086-437481:- | gene-YKL003C_NCIM3186 | rna-NM_001179569.3_NCIM3186 | cds-NP_012923.3_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005273.1:435357-435752:- | gene-YKL003C_NCYC1407 | rna-NM_001179569.3_NCYC1407 | cds-NP_012923.3_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994150.1:460017-460412:- | gene-YKL003C_PE2H3 | rna-NM_001179569.3_PE2H3 | cds-NP_012923.3_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999882.1:444759-445154:- | gene-YKL003C_PE2H4 | rna-NM_001179569.3_PE2H4 | cds-NP_012923.3_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001143.9:437097-437492:- | gene-YKL003C_S288C | rna-NM_001179569.3_S288C | cds-NP_012923.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000027.1:115361-115756:- | gene-YKL003C_SA1 | rna-NM_001179569.3_SA1 | cds-NP_012923.3_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005497.1:435783-436178:- | gene-YKL003C_ThermosaccDry | rna-NM_001179569.3_ThermosaccDry | cds-NP_012923.3_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005465.1:435040-435435:- | gene-YKL003C_VR1 | rna-NM_001179569.3_VR1 | cds-NP_012923.3_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000022.1:433824-434219:- | gene-YKL003C_ZTW1 | rna-NM_001179569.3_ZTW1 | cds-NP_012923.3_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047497.1:458811-459206:- | gene-YKL003C_Sparadoxus | rna-NM_001179569.3_Sparadoxus | cds-NP_012923.3_Sparadoxus | 92.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |