Gene name: MRP13
Reference locus (S288C): YGR084C
Gene biotype: protein_coding
Description: 37S ribosomal protein MRP13, mitochondrial; Mitochondrial ribosomal protein of the small subunit
Top 10 interactors (score): MRPS5 (0.998); MRP4 (0.998); RSM10 (0.996); RSM26 (0.994); RSM27 (0.994); MRPS9 (0.994); RSM25 (0.993); MRPS16 (0.993); MRPS8 (0.993); NAM9 (0.993); RSM18 (0.992); MRPS18 (0.992); PET123 (0.992); RSM23 (0.991); RSM19 (0.99); MRP10 (0.99); RSM7 (0.99); MRP1 (0.989); MRP21 (0.989); MRP51 (0.989)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:630799-631818:- | gene-YGR084C_AKU4011 | rna-NM_001181213.3_AKU4011 | cds-NP_011598.3_AKU4011 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000173.1:67099-68118:- | gene-YGR084C_BG1 | rna-NM_001181213.3_BG1 | cds-NP_011598.3_BG1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:633075-634094:- | gene-YGR084C_Bruggeman | rna-NM_001181213.3_Bruggeman | cds-NP_011598.3_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:631512-632531:- | gene-YGR084C_CAT1 | rna-NM_001181213.3_CAT1 | cds-NP_011598.3_CAT1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:632092-633111:- | gene-YGR084C_CBS1585 | rna-NM_001181213.3_CBS1585 | cds-NP_011598.3_CBS1585 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:633430-634449:- | gene-YGR084C_CBS436 | rna-NM_001181213.3_CBS436 | cds-NP_011598.3_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | MBVQ01000080.1:565-1584:+ | gene-YGR084C_CBS6412 | rna-NM_001181213.3_CBS6412 | cds-NP_011598.3_CBS6412 | 99.1 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:628728-629747:- | gene-YGR084C_CBS6413 | rna-NM_001181213.3_CBS6413 | cds-NP_011598.3_CBS6413 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:646796-647815:- | gene-YGR084C_CENPK1137D | rna-NM_001181213.3_CENPK1137D | cds-NP_011598.3_CENPK1137D | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:619062-620081:- | gene-YGR084C_EthanolRed | rna-NM_001181213.3_EthanolRed | cds-NP_011598.3_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:622519-623538:- | gene-YGR084C_FaliES1 | rna-NM_001181213.3_FaliES1 | cds-NP_011598.3_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000435.1:73465-74484:- | gene-YGR084C_JAY291 | rna-NM_001181213.3_JAY291 | cds-NP_011598.3_JAY291 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:629784-630803:- | gene-YGR084C_MUCL30387 | rna-NM_001181213.3_MUCL30387 | cds-NP_011598.3_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:633119-634138:- | gene-YGR084C_MUCL30388 | rna-NM_001181213.3_MUCL30388 | cds-NP_011598.3_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:627988-629007:- | gene-YGR084C_MUCL39482 | rna-NM_001181213.3_MUCL39482 | cds-NP_011598.3_MUCL39482 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:637752-638771:- | gene-YGR084C_MUCL42920 | rna-NM_001181213.3_MUCL42920 | cds-NP_011598.3_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:647123-648142:- | gene-YGR084C_NCIM3186 | rna-NM_001181213.3_NCIM3186 | cds-NP_011598.3_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:622179-623198:- | gene-YGR084C_NCYC1407 | rna-NM_001181213.3_NCYC1407 | cds-NP_011598.3_NCYC1407 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:625369-626388:- | gene-YGR084C_PE2H3 | rna-NM_001181213.3_PE2H3 | cds-NP_011598.3_PE2H3 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:630489-631508:- | gene-YGR084C_PE2H4 | rna-NM_001181213.3_PE2H4 | cds-NP_011598.3_PE2H4 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:647123-648142:- | gene-YGR084C_S288C | rna-NM_001181213.3_S288C | cds-NP_011598.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000015.1:73693-74712:- | gene-YGR084C_SA1 | rna-NM_001181213.3_SA1 | cds-NP_011598.3_SA1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:641863-642882:- | gene-YGR084C_ThermosaccDry | rna-NM_001181213.3_ThermosaccDry | cds-NP_011598.3_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:738814-739833:- | gene-YGR084C_VR1 | rna-NM_001181213.3_VR1 | cds-NP_011598.3_VR1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000015.1:97314-98333:- | gene-YGR084C_ZTW1 | rna-NM_001181213.3_ZTW1 | cds-NP_011598.3_ZTW1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:632410-633432:- | gene-YGR084C_Sparadoxus | rna-NM_001181213.3_Sparadoxus | cds-NP_011598.3_Sparadoxus | 88.0 | 99.8 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |