MRP10 (YDL045W-A)


Gene profile

Gene name: MRP10
Reference locus (S288C): YDL045W-A
Gene biotype: protein_coding

Description: Mitochondrial ribosomal protein of the small subunit; contains twin cysteine-x9-cysteine motifs; oxidized by Mia40p during import into mitochondria

Top 10 interactors (score): RSM23 (0.999); MRP17 (0.999); MRPS9 (0.999); MRPS28 (0.999); RSM18 (0.999); MRPS16 (0.999); RSM27 (0.999); MRP2 (0.999); MRPS5 (0.999); RSM19 (0.999); RSM7 (0.998); MRPS18 (0.997); MRPS8 (0.997); MRP21 (0.996); NAM9 (0.996); RSM26 (0.996); MRPL8 (0.996); RSM24 (0.995); RSM25 (0.995); MRPL4 (0.994)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005298.1:356867-357154:+ gene-YDL045W-A_AKU4011 rna-NM_001184304.1_AKU4011 cds-NP_010238.1_AKU4011 98.6 100.0 Mismatch 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000102.1:192550-192837:- gene-YDL045W-A_BG1 rna-NM_001184304.1_BG1 cds-NP_010238.1_BG1 98.6 100.0 Mismatch 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005506.1:375347-375634:+ gene-YDL045W-A_Bruggeman rna-NM_001184304.1_Bruggeman cds-NP_010238.1_Bruggeman 100.0 100.0 Verified 1 1 1 True True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005522.1:371569-371856:+ gene-YDL045W-A_CAT1 rna-NM_001184304.1_CAT1 cds-NP_010238.1_CAT1 100.0 100.0 Verified 1 1 1 True True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005362.1:355117-355404:+ gene-YDL045W-A_CBS1585 rna-NM_001184304.1_CBS1585 cds-NP_010238.1_CBS1585 98.6 100.0 Mismatch 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005346.1:371789-372076:+ gene-YDL045W-A_CBS436 rna-NM_001184304.1_CBS436 cds-NP_010238.1_CBS436 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005330.1:352824-353111:+ gene-YDL045W-A_CBS6412 rna-NM_001184304.1_CBS6412 cds-NP_010238.1_CBS6412 98.6 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005314.1:373156-373443:+ gene-YDL045W-A_CBS6413 rna-NM_001184304.1_CBS6413 cds-NP_010238.1_CBS6413 98.6 100.0 Mismatch 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001525.1:371108-371395:+ gene-YDL045W-A_CENPK1137D rna-NM_001184304.1_CENPK1137D cds-NP_010238.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005474.1:367650-367937:+ gene-YDL045W-A_EthanolRed rna-NM_001184304.1_EthanolRed cds-NP_010238.1_EthanolRed 98.2 100.0 Mismatch 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005538.1:373878-374165:+ gene-YDL045W-A_FaliES1 rna-NM_001184304.1_FaliES1 cds-NP_010238.1_FaliES1 98.2 100.0 Mismatch 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000097.1:11619-11906:- gene-YDL045W-A_JAY291 rna-NM_001184304.1_JAY291 cds-NP_010238.1_JAY291 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005410.1:372014-372301:+ gene-YDL045W-A_MUCL30387 rna-NM_001184304.1_MUCL30387 cds-NP_010238.1_MUCL30387 98.9 100.0 Mismatch 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005442.1:363132-363419:+ gene-YDL045W-A_MUCL30388 rna-NM_001184304.1_MUCL30388 cds-NP_010238.1_MUCL30388 98.9 100.0 Mismatch 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005282.1:356321-356608:+ gene-YDL045W-A_MUCL39482 rna-NM_001184304.1_MUCL39482 cds-NP_010238.1_MUCL39482 98.6 100.0 Mismatch 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005426.1:278238-278525:+ gene-YDL045W-A_MUCL42920 rna-NM_001184304.1_MUCL42920 cds-NP_010238.1_MUCL42920 100.0 100.0 Verified 1 1 1 True True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011813.1:372171-372458:+ gene-YDL045W-A_NCIM3186 rna-NM_001184304.1_NCIM3186 cds-NP_010238.1_NCIM3186 98.9 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005266.1:356202-356489:+ gene-YDL045W-A_NCYC1407 rna-NM_001184304.1_NCYC1407 cds-NP_010238.1_NCYC1407 98.6 100.0 Mismatch 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994143.1:363381-363668:+ gene-YDL045W-A_PE2H3 rna-NM_001184304.1_PE2H3 cds-NP_010238.1_PE2H3 100.0 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999875.1:363383-363670:+ gene-YDL045W-A_PE2H4 rna-NM_001184304.1_PE2H4 cds-NP_010238.1_PE2H4 100.0 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001136.10:372248-372535:+ gene-YDL045W-A_S288C rna-NM_001184304.1_S288C cds-NP_010238.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000010.1:62392-62679:- gene-YDL045W-A_SA1 rna-NM_001184304.1_SA1 cds-NP_010238.1_SA1 100.0 100.0 Verified 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005490.1:373340-373627:+ gene-YDL045W-A_ThermosaccDry rna-NM_001184304.1_ThermosaccDry cds-NP_010238.1_ThermosaccDry 98.2 100.0 Mismatch 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005458.1:376270-376557:+ gene-YDL045W-A_VR1 rna-NM_001184304.1_VR1 cds-NP_010238.1_VR1 100.0 100.0 Verified 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000006.1:371281-371568:+ gene-YDL045W-A_ZTW1 rna-NM_001184304.1_ZTW1 cds-NP_010238.1_ZTW1 98.6 100.0 Mismatch 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047490.1:373703-373990:+ gene-YDL045W-A_Sparadoxus rna-NM_001184304.1_Sparadoxus cds-NP_010238.1_Sparadoxus 89.9 100.0 Verified 1 1 1 False True False False False

Additional files