Gene name: MRM1
Reference locus (S288C): YOR201C
Gene biotype: protein_coding
Description: rRNA methyltransferase 1, mitochondrial; Ribose methyltransferase; modifies a functionally critical, conserved nucleotide in mitochondrial 21S rRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
Top 10 interactors (score): MRM2 (0.981); YGR283C (0.92); MTG1 (0.912); YMR310C (0.866); MTG2 (0.851); MRH4 (0.838); TRM10 (0.831); SPB1 (0.79); HIS3 (0.787); DED1 (0.784); PUF3 (0.763); MRPL10 (0.759); TRM44 (0.748); RCM1 (0.743); MSS116 (0.714); GCD14 (0.713); NGL1 (0.694); TRZ1 (0.685); MRPL36 (0.676); SFM1 (0.654)
Homologues (species, bitscore): MRM1 (Homo sapiens, 118.2); Mrm1 (Mus musculus, 106.3); mrm1 (Danio rerio, 114.4); Y45F3A.9 (Caenorhabditis elegans, 80.9); AT2G19870 (Arabidopsis thaliana, 108.6)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005309.1:711253-712491:- | gene-YOR201C_AKU4011 | rna-NM_001183620.3_AKU4011 | cds-NP_014844.3_AKU4011 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000123.1:113291-114529:- | gene-YOR201C_BG1 | rna-NM_001183620.3_BG1 | cds-NP_014844.3_BG1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005517.1:696084-697322:- | gene-YOR201C_Bruggeman | rna-NM_001183620.3_Bruggeman | cds-NP_014844.3_Bruggeman | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005533.1:697366-698604:- | gene-YOR201C_CAT1 | rna-NM_001183620.3_CAT1 | cds-NP_014844.3_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005373.1:694240-695478:- | gene-YOR201C_CBS1585 | rna-NM_001183620.3_CBS1585 | cds-NP_014844.3_CBS1585 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005357.1:692931-694169:- | gene-YOR201C_CBS436 | rna-NM_001183620.3_CBS436 | cds-NP_014844.3_CBS436 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005341.1:691358-692596:- | gene-YOR201C_CBS6412 | rna-NM_001183620.3_CBS6412 | cds-NP_014844.3_CBS6412 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005325.1:699997-701235:- | gene-YOR201C_CBS6413 | rna-NM_001183620.3_CBS6413 | cds-NP_014844.3_CBS6413 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001536.1:720224-721462:- | gene-YOR201C_CENPK1137D | rna-NM_001183620.3_CENPK1137D | cds-NP_014844.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005485.1:687383-688621:- | gene-YOR201C_EthanolRed | rna-NM_001183620.3_EthanolRed | cds-NP_014844.3_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005549.1:692780-694018:- | gene-YOR201C_FaliES1 | rna-NM_001183620.3_FaliES1 | cds-NP_014844.3_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000381.1:132730-133968:+ | gene-YOR201C_JAY291 | rna-NM_001183620.3_JAY291 | cds-NP_014844.3_JAY291 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005421.1:700049-701287:- | gene-YOR201C_MUCL30387 | rna-NM_001183620.3_MUCL30387 | cds-NP_014844.3_MUCL30387 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005453.1:707467-708705:- | gene-YOR201C_MUCL30388 | rna-NM_001183620.3_MUCL30388 | cds-NP_014844.3_MUCL30388 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005293.1:701569-702807:- | gene-YOR201C_MUCL39482 | rna-NM_001183620.3_MUCL39482 | cds-NP_014844.3_MUCL39482 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005437.1:711152-712390:- | gene-YOR201C_MUCL42920 | rna-NM_001183620.3_MUCL42920 | cds-NP_014844.3_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:720359-721597:- | gene-YOR201C_NCIM3186 | rna-NM_001183620.3_NCIM3186 | cds-NP_014844.3_NCIM3186 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005277.1:701667-702905:- | gene-YOR201C_NCYC1407 | rna-NM_001183620.3_NCYC1407 | cds-NP_014844.3_NCYC1407 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994154.1:701065-702303:- | gene-YOR201C_PE2H3 | rna-NM_001183620.3_PE2H3 | cds-NP_014844.3_PE2H3 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999886.1:711442-712680:- | gene-YOR201C_PE2H4 | rna-NM_001183620.3_PE2H4 | cds-NP_014844.3_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:720470-721708:- | gene-YOR201C_S288C | rna-NM_001183620.3_S288C | cds-NP_014844.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000006.1:130471-131709:- | gene-YOR201C_SA1 | rna-NM_001183620.3_SA1 | cds-NP_014844.3_SA1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005501.1:691965-693203:- | gene-YOR201C_ThermosaccDry | rna-NM_001183620.3_ThermosaccDry | cds-NP_014844.3_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:755504-756742:- | gene-YOR201C_VR1 | rna-NM_001183620.3_VR1 | cds-NP_014844.3_VR1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000032.1:424878-426116:- | gene-YOR201C_ZTW1 | rna-NM_001183620.3_ZTW1 | cds-NP_014844.3_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047501.1:697845-699083:- | gene-YOR201C_Sparadoxus | rna-NM_001183620.3_Sparadoxus | cds-NP_014844.3_Sparadoxus | 87.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |