Gene name: MRH4
Reference locus (S288C): YGL064C
Gene biotype: protein_coding
Description: Mitochondrial ATP-dependent RNA helicase of the DEAD-box family; required for assembly of the large subunit of mitochondrial ribosomes; binds to the large subunit rRNA, 21S_rRNA; localizes to the matrix face of the mitochondrial inner membrane and associates with the large subunit precursor and with mature ribosomes
Top 10 interactors (score): CEF1 (0.973); SNU114 (0.963); PRP6 (0.961); CDC33 (0.904); MRPL9 (0.884); MTG1 (0.845); SUV3 (0.843); MRM1 (0.838); DHR2 (0.819); PUF3 (0.816); SUB2 (0.809); NAM7 (0.809); YLR419W (0.801); MTG2 (0.793); MRPL40 (0.782); GCD11 (0.764); RPG1 (0.763); IRC3 (0.752); UPF3 (0.75); MTR4 (0.734)
Homologues (species, bitscore): DDX23 (Homo sapiens, 108.2); Ddx23 (Mus musculus, 107.8); ddx23 (Danio rerio, 108.2); ddx23 (Xenopus tropicalis, 107.5); Rm62 (Drosophila melanogaster, 110.9); ddx-23 (Caenorhabditis elegans, 100.1); AT3G06980 (Arabidopsis thaliana, 127.5)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:384512-386197:- | gene-YGL064C_AKU4011 | rna-NM_001180929.1_AKU4011 | cds-NP_011451.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000132.1:19194-20879:+ | gene-YGL064C_BG1 | rna-NM_001180929.1_BG1 | cds-NP_011451.1_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:386991-388676:- | gene-YGL064C_Bruggeman | rna-NM_001180929.1_Bruggeman | cds-NP_011451.1_Bruggeman | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:383988-385673:- | gene-YGL064C_CAT1 | rna-NM_001180929.1_CAT1 | cds-NP_011451.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:388057-389742:- | gene-YGL064C_CBS1585 | rna-NM_001180929.1_CBS1585 | cds-NP_011451.1_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:382198-383883:- | gene-YGL064C_CBS436 | rna-NM_001180929.1_CBS436 | cds-NP_011451.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:372216-373901:- | gene-YGL064C_CBS6412 | rna-NM_001180929.1_CBS6412 | cds-NP_011451.1_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:382142-383827:- | gene-YGL064C_CBS6413 | rna-NM_001180929.1_CBS6413 | cds-NP_011451.1_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:381710-383395:- | gene-YGL064C_CENPK1137D | rna-NM_001180929.1_CENPK1137D | cds-NP_011451.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:373584-375269:- | gene-YGL064C_EthanolRed | rna-NM_001180929.1_EthanolRed | cds-NP_011451.1_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:376146-377831:- | gene-YGL064C_FaliES1 | rna-NM_001180929.1_FaliES1 | cds-NP_011451.1_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000369.1:61855-63540:- | gene-YGL064C_JAY291 | rna-NM_001180929.1_JAY291 | cds-NP_011451.1_JAY291 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:384187-385872:- | gene-YGL064C_MUCL30387 | rna-NM_001180929.1_MUCL30387 | cds-NP_011451.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:387234-388919:- | gene-YGL064C_MUCL30388 | rna-NM_001180929.1_MUCL30388 | cds-NP_011451.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:384365-386050:- | gene-YGL064C_MUCL39482 | rna-NM_001180929.1_MUCL39482 | cds-NP_011451.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005438.1:188055-189740:+ | gene-YGL064C_MUCL42920 | rna-NM_001180929.1_MUCL42920 | cds-NP_011451.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:381523-383208:- | gene-YGL064C_NCIM3186 | rna-NM_001180929.1_NCIM3186 | cds-NP_011451.1_NCIM3186 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:375898-377583:- | gene-YGL064C_NCYC1407 | rna-NM_001180929.1_NCYC1407 | cds-NP_011451.1_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:377556-379241:- | gene-YGL064C_PE2H3 | rna-NM_001180929.1_PE2H3 | cds-NP_011451.1_PE2H3 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:382606-384291:- | gene-YGL064C_PE2H4 | rna-NM_001180929.1_PE2H4 | cds-NP_011451.1_PE2H4 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:381523-383208:- | gene-YGL064C_S288C | rna-NM_001180929.1_S288C | cds-NP_011451.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000096.1:16691-18376:- | gene-YGL064C_SA1 | rna-NM_001180929.1_SA1 | cds-NP_011451.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:376397-378082:- | gene-YGL064C_ThermosaccDry | rna-NM_001180929.1_ThermosaccDry | cds-NP_011451.1_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:486783-488468:- | gene-YGL064C_VR1 | rna-NM_001180929.1_VR1 | cds-NP_011451.1_VR1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000014.1:373759-375444:- | gene-YGL064C_ZTW1 | rna-NM_001180929.1_ZTW1 | cds-NP_011451.1_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:379386-381071:- | gene-YGL064C_Sparadoxus | rna-NM_001180929.1_Sparadoxus | cds-NP_011451.1_Sparadoxus | 87.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |