Gene name: MPP6
Reference locus (S288C): YNR024W
Gene biotype: protein_coding
Description: M-phase phosphoprotein 6 homolog; Nuclear exosome-associated RNA binding protein; involved in surveillance of pre-rRNAs and pre-mRNAs, and the degradation of cryptic non-coding RNAs (ncRNA); copurifies with ribosomes; relocalizes to the cytosol in response to hypoxia
Top 10 interactors (score): LRP1 (0.999); RRP42 (0.999); RRP43 (0.999); RRP6 (0.999); SKI6 (0.999); CSL4 (0.999); MTR3 (0.999); RRP40 (0.999); RRP45 (0.999); RRP4 (0.999); RRP46 (0.999); DIS3 (0.999); FCF2 (0.969); MTR4 (0.967); RRT14 (0.943); UTP14 (0.928); UTP11 (0.914); IMP4 (0.898); NOP56 (0.873); UTP7 (0.871)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005308.1:656060-656620:+ | gene-YNR024W_AKU4011 | rna-NM_001183201.3_AKU4011 | cds-NP_014421.3_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000155.1:563924-564484:+ | gene-YNR024W_BG1 | rna-NM_001183201.3_BG1 | cds-NP_014421.3_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005516.1:673511-674071:+ | gene-YNR024W_Bruggeman | rna-NM_001183201.3_Bruggeman | cds-NP_014421.3_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005532.1:707769-708329:+ | gene-YNR024W_CAT1 | rna-NM_001183201.3_CAT1 | cds-NP_014421.3_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005372.1:661815-662375:+ | gene-YNR024W_CBS1585 | rna-NM_001183201.3_CBS1585 | cds-NP_014421.3_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005356.1:723483-724043:+ | gene-YNR024W_CBS436 | rna-NM_001183201.3_CBS436 | cds-NP_014421.3_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005340.1:651003-651563:+ | gene-YNR024W_CBS6412 | rna-NM_001183201.3_CBS6412 | cds-NP_014421.3_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005324.1:652708-653268:+ | gene-YNR024W_CBS6413 | rna-NM_001183201.3_CBS6413 | cds-NP_014421.3_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001535.1:666162-666722:+ | gene-YNR024W_CENPK1137D | rna-NM_001183201.3_CENPK1137D | cds-NP_014421.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005484.1:657752-658312:+ | gene-YNR024W_EthanolRed | rna-NM_001183201.3_EthanolRed | cds-NP_014421.3_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005548.1:648955-649515:+ | gene-YNR024W_FaliES1 | rna-NM_001183201.3_FaliES1 | cds-NP_014421.3_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000037.1:53266-53826:- | gene-YNR024W_JAY291 | rna-NM_001183201.3_JAY291 | cds-NP_014421.3_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005420.1:671268-671828:+ | gene-YNR024W_MUCL30387 | rna-NM_001183201.3_MUCL30387 | cds-NP_014421.3_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005452.1:712091-712651:+ | gene-YNR024W_MUCL30388 | rna-NM_001183201.3_MUCL30388 | cds-NP_014421.3_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005292.1:653315-653875:+ | gene-YNR024W_MUCL39482 | rna-NM_001183201.3_MUCL39482 | cds-NP_014421.3_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005436.1:657485-658045:+ | gene-YNR024W_MUCL42920 | rna-NM_001183201.3_MUCL42920 | cds-NP_014421.3_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011823.1:672378-672938:+ | gene-YNR024W_NCIM3186 | rna-NM_001183201.3_NCIM3186 | cds-NP_014421.3_NCIM3186 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005276.1:655823-656383:+ | gene-YNR024W_NCYC1407 | rna-NM_001183201.3_NCYC1407 | cds-NP_014421.3_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994153.1:656910-657470:+ | gene-YNR024W_PE2H3 | rna-NM_001183201.3_PE2H3 | cds-NP_014421.3_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999885.1:658228-658788:+ | gene-YNR024W_PE2H4 | rna-NM_001183201.3_PE2H4 | cds-NP_014421.3_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001146.8:672409-672969:+ | gene-YNR024W_S288C | rna-NM_001183201.3_S288C | cds-NP_014421.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000074.1:53416-53976:- | gene-YNR024W_SA1 | rna-NM_001183201.3_SA1 | cds-NP_014421.3_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005500.1:649292-649852:+ | gene-YNR024W_ThermosaccDry | rna-NM_001183201.3_ThermosaccDry | cds-NP_014421.3_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005468.1:691289-691849:+ | gene-YNR024W_VR1 | rna-NM_001183201.3_VR1 | cds-NP_014421.3_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000030.1:558703-559263:+ | gene-YNR024W_ZTW1 | rna-NM_001183201.3_ZTW1 | cds-NP_014421.3_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047500.1:663371-663931:+ | gene-YNR024W_Sparadoxus | rna-NM_001183201.3_Sparadoxus | cds-NP_014421.3_Sparadoxus | 87.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |