Gene name: MPP10
Reference locus (S288C): YJR002W
Gene biotype: protein_coding
Description: U3 small nucleolar RNA-associated protein MPP10; Component of the SSU processome and 90S preribosome; required for pre-18S rRNA processing, interacts with and controls the stability of Imp3p and Imp4p, essential for viability; similar to human Mpp10p
Top 10 interactors (score): UTP7 (0.999); SAS10 (0.999); NOP14 (0.999); UTP21 (0.999); UTP20 (0.999); NOC4 (0.999); UTP14 (0.999); UTP9 (0.999); HCA4 (0.999); BUD21 (0.999); RRP7 (0.999); KRR1 (0.999); ENP1 (0.999); UTP11 (0.999); UTP6 (0.999); UTP4 (0.999); BMS1 (0.999); DHR2 (0.999); RRP5 (0.999); BFR2 (0.999)
Homologues (species, bitscore): MPHOSPH10 (Homo sapiens, 177.6); Mphosph10 (Mus musculus, 175.3); mphosph10 (Danio rerio, 178.7); mphosph10 (Xenopus tropicalis, 150.2); CG13097 (Drosophila melanogaster, 160.6); Y75B8A.7 (Caenorhabditis elegans, 103.6); AT5G66540 (Arabidopsis thaliana, 176.0)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005304.1:422034-423815:+ | gene-YJR002W_AKU4011 | rna-NM_001181659.3_AKU4011 | cds-NP_012535.3_AKU4011 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000190.1:188912-190693:- | gene-YJR002W_BG1 | rna-NM_001181659.3_BG1 | cds-NP_012535.3_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005512.1:436131-437912:+ | gene-YJR002W_Bruggeman | rna-NM_001181659.3_Bruggeman | cds-NP_012535.3_Bruggeman | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005528.1:440072-441853:+ | gene-YJR002W_CAT1 | rna-NM_001181659.3_CAT1 | cds-NP_012535.3_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005368.1:433619-435400:+ | gene-YJR002W_CBS1585 | rna-NM_001181659.3_CBS1585 | cds-NP_012535.3_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005352.1:452598-454379:+ | gene-YJR002W_CBS436 | rna-NM_001181659.3_CBS436 | cds-NP_012535.3_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005336.1:421848-423629:+ | gene-YJR002W_CBS6412 | rna-NM_001181659.3_CBS6412 | cds-NP_012535.3_CBS6412 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005320.1:424075-425856:+ | gene-YJR002W_CBS6413 | rna-NM_001181659.3_CBS6413 | cds-NP_012535.3_CBS6413 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001531.1:421290-423071:+ | gene-YJR002W_CENPK1137D | rna-NM_001181659.3_CENPK1137D | cds-NP_012535.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005480.1:427006-428787:+ | gene-YJR002W_EthanolRed | rna-NM_001181659.3_EthanolRed | cds-NP_012535.3_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005544.1:438147-439928:+ | gene-YJR002W_FaliES1 | rna-NM_001181659.3_FaliES1 | cds-NP_012535.3_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000321.1:13313-15093:- | gene-YJR002W_JAY291 | rna-NM_001181659.3_JAY291 | cds-NP_012535.3_JAY291 | 99.8 | 99.9 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005416.1:436458-438239:+ | gene-YJR002W_MUCL30387 | rna-NM_001181659.3_MUCL30387 | cds-NP_012535.3_MUCL30387 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005448.1:432980-434761:+ | gene-YJR002W_MUCL30388 | rna-NM_001181659.3_MUCL30388 | cds-NP_012535.3_MUCL30388 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005288.1:426953-428734:+ | gene-YJR002W_MUCL39482 | rna-NM_001181659.3_MUCL39482 | cds-NP_012535.3_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005432.1:432393-434174:+ | gene-YJR002W_MUCL42920 | rna-NM_001181659.3_MUCL42920 | cds-NP_012535.3_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011819.1:438844-440625:+ | gene-YJR002W_NCIM3186 | rna-NM_001181659.3_NCIM3186 | cds-NP_012535.3_NCIM3186 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005272.1:424847-426628:+ | gene-YJR002W_NCYC1407 | rna-NM_001181659.3_NCYC1407 | cds-NP_012535.3_NCYC1407 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994149.1:443256-445037:+ | gene-YJR002W_PE2H3 | rna-NM_001181659.3_PE2H3 | cds-NP_012535.3_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999881.1:436950-438731:+ | gene-YJR002W_PE2H4 | rna-NM_001181659.3_PE2H4 | cds-NP_012535.3_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001142.9:438865-440646:+ | gene-YJR002W_S288C | rna-NM_001181659.3_S288C | cds-NP_012535.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000003.1:234874-236655:+ | gene-YJR002W_SA1 | rna-NM_001181659.3_SA1 | cds-NP_012535.3_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005496.1:431806-433587:+ | gene-YJR002W_ThermosaccDry | rna-NM_001181659.3_ThermosaccDry | cds-NP_012535.3_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005464.1:434175-435956:+ | gene-YJR002W_VR1 | rna-NM_001181659.3_VR1 | cds-NP_012535.3_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000021.1:411808-413589:+ | gene-YJR002W_ZTW1 | rna-NM_001181659.3_ZTW1 | cds-NP_012535.3_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047496.1:436664-438448:+ | gene-YJR002W_Sparadoxus | rna-NM_001181659.3_Sparadoxus | cds-NP_012535.3_Sparadoxus | 89.0 | 99.7 | Verified | 1 | 1 | 1 | False | True | False | False | False |