Gene name: MNN4
Reference locus (S288C): YKL201C
Gene biotype: protein_coding
Description: Protein MNN4; Putative positive regulator of mannosylphosphate transferase Mnn6p; involved in mannosylphosphorylation of N-linked oligosaccharides; expression increases in late-logarithmic and stationary growth phases; coding sequence contains length polymorphisms in different strains; MNN4 has a paralog, YJR061W, that arose from the whole genome duplication
Top 10 interactors (score): KTR6 (0.964); MNN1 (0.934); MNN2 (0.911); OCH1 (0.909); KRE2 (0.829); MPO1 (0.813); MNN5 (0.811); MNT4 (0.747); VPS74 (0.698); MNN9 (0.674); MNN10 (0.62); MNT2 (0.617); TAF1 (0.602); PNO1 (0.573); SVP26 (0.551); MNS1 (0.52); PMR1 (0.514); AMS1 (0.499); ALG5 (0.499); PMT2 (0.489)
Homologues (species, bitscore): WDR87 (Homo sapiens, 65.9); Ankhd1 (Mus musculus, 57.0); pleca (Danio rerio, 69.7); GIGYF2 (Xenopus tropicalis, 84.7); sls (Drosophila melanogaster, 60.1); PMD1 (Arabidopsis thaliana, 50.4)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005305.1:50244-53834:- | gene-YKL201C_AKU4011 | rna-NM_001179766.1_AKU4011 | cds-NP_012721.1_AKU4011 | 97.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000030.1:27329-30796:- | gene-YKL201C_BG1 | rna-NM_001179766.1_BG1 | cds-NP_012721.1_BG1 | 97.1 | 98.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005513.1:67916-71479:- | gene-YKL201C_Bruggeman | rna-NM_001179766.1_Bruggeman | cds-NP_012721.1_Bruggeman | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005529.1:63109-66678:- | gene-YKL201C_CAT1 | rna-NM_001179766.1_CAT1 | cds-NP_012721.1_CAT1 | 97.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005369.1:62256-65819:- | gene-YKL201C_CBS1585 | rna-NM_001179766.1_CBS1585 | cds-NP_012721.1_CBS1585 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005353.1:61458-65027:- | gene-YKL201C_CBS436 | rna-NM_001179766.1_CBS436 | cds-NP_012721.1_CBS436 | 97.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005337.1:47513-51076:- | gene-YKL201C_CBS6412 | rna-NM_001179766.1_CBS6412 | cds-NP_012721.1_CBS6412 | 98.7 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005321.1:62893-66456:- | gene-YKL201C_CBS6413 | rna-NM_001179766.1_CBS6413 | cds-NP_012721.1_CBS6413 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001532.1:63711-67250:- | gene-YKL201C_CENPK1137D | rna-NM_001179766.1_CENPK1137D | cds-NP_012721.1_CENPK1137D | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005481.1:61727-65266:- | gene-YKL201C_EthanolRed | rna-NM_001179766.1_EthanolRed | cds-NP_012721.1_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005545.1:61786-65325:- | gene-YKL201C_FaliES1 | rna-NM_001179766.1_FaliES1 | cds-NP_012721.1_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000006.2:61402-64869:- | gene-YKL201C_JAY291 | rna-NM_001179766.1_JAY291 | cds-NP_012721.1_JAY291 | 97.1 | 98.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005417.1:70451-74014:- | gene-YKL201C_MUCL30387 | rna-NM_001179766.1_MUCL30387 | cds-NP_012721.1_MUCL30387 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005449.1:64539-68102:- | gene-YKL201C_MUCL30388 | rna-NM_001179766.1_MUCL30388 | cds-NP_012721.1_MUCL30388 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005289.1:62313-65876:- | gene-YKL201C_MUCL39482 | rna-NM_001179766.1_MUCL39482 | cds-NP_012721.1_MUCL39482 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005433.1:65607-69164:- | gene-YKL201C_MUCL42920 | rna-NM_001179766.1_MUCL42920 | cds-NP_012721.1_MUCL42920 | 98.7 | 99.9 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011820.1:63919-67455:- | gene-YKL201C_NCIM3186 | rna-NM_001179766.1_NCIM3186 | cds-NP_012721.1_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005273.1:62337-65900:- | gene-YKL201C_NCYC1407 | rna-NM_001179766.1_NCYC1407 | cds-NP_012721.1_NCYC1407 | 98.7 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994150.1:70036-73407:- | gene-YKL201C_PE2H3 | rna-NM_001179766.1_PE2H3 | cds-NP_012721.1_PE2H3 | 94.9 | 95.3 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999882.1:66234-69701:- | gene-YKL201C_PE2H4 | rna-NM_001179766.1_PE2H4 | cds-NP_012721.1_PE2H4 | 97.1 | 98.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001143.9:63930-67466:- | gene-YKL201C_S288C | rna-NM_001179766.1_S288C | cds-NP_012721.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000092.1:430-3942:+ | gene-YKL201C_SA1 | rna-NM_001179766.1_SA1 | cds-NP_012721.1_SA1 | 97.3 | 98.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005497.1:62534-66073:- | gene-YKL201C_ThermosaccDry | rna-NM_001179766.1_ThermosaccDry | cds-NP_012721.1_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005465.1:61640-65107:- | gene-YKL201C_VR1 | rna-NM_001179766.1_VR1 | cds-NP_012721.1_VR1 | 97.1 | 98.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000022.1:61447-65001:- | gene-YKL201C_ZTW1 | rna-NM_001179766.1_ZTW1 | cds-NP_012721.1_ZTW1 | 99.0 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047497.1:70171-73662:- | gene-YKL201C_Sparadoxus | rna-NM_001179766.1_Sparadoxus | cds-NP_012721.1_Sparadoxus | 87.4 | 98.5 | Verified | 1 | 1 | 0 | False | False | False | True | False |