MND2 (YIR025W)


Gene profile

Gene name: MND2
Reference locus (S288C): YIR025W
Gene biotype: protein_coding

Description: Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C); necessary for maintaining sister chromatid cohesion in prophase I of meiosis by inhibiting premature ubiquitination and subsequent degradation of substrates by the APC(Ama1) ubiquitin ligase; Belongs to the APC15 family

Top 10 interactors (score): APC1 (0.999); APC4 (0.999); APC9 (0.999); CDC27 (0.999); CDC23 (0.999); DOC1 (0.999); APC5 (0.999); SWM1 (0.999); CDC16 (0.999); CDC26 (0.999); APC2 (0.999); APC11 (0.996); AMA1 (0.978); CDC20 (0.919); MET30 (0.903); ASI2 (0.9); ASI3 (0.9); CDC4 (0.9); SLX8 (0.9); SLX5 (0.9)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005303.1:401889-402992:+ gene-YIR025W_AKU4011 rna-NM_001179547.1_AKU4011 cds-NP_012291.1_AKU4011 99.2 99.7 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000072.1:23918-25021:- gene-YIR025W_BG1 rna-NM_001179547.1_BG1 cds-NP_012291.1_BG1 98.4 99.7 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005511.1:407739-408842:+ gene-YIR025W_Bruggeman rna-NM_001179547.1_Bruggeman cds-NP_012291.1_Bruggeman 99.2 99.7 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005527.1:393008-394111:+ gene-YIR025W_CAT1 rna-NM_001179547.1_CAT1 cds-NP_012291.1_CAT1 98.8 99.7 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005367.1:402842-403945:+ gene-YIR025W_CBS1585 rna-NM_001179547.1_CBS1585 cds-NP_012291.1_CBS1585 99.2 99.7 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005351.1:394810-395913:+ gene-YIR025W_CBS436 rna-NM_001179547.1_CBS436 cds-NP_012291.1_CBS436 98.8 99.7 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005327.1:101348-102451:+ gene-YIR025W_CBS6412 rna-NM_001179547.1_CBS6412 cds-NP_012291.1_CBS6412 99.1 99.7 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005319.1:393943-395046:+ gene-YIR025W_CBS6413 rna-NM_001179547.1_CBS6413 cds-NP_012291.1_CBS6413 99.1 99.7 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001530.1:395320-396426:+ gene-YIR025W_CENPK1137D rna-NM_001179547.1_CENPK1137D cds-NP_012291.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005479.1:384806-385909:+ gene-YIR025W_EthanolRed rna-NM_001179547.1_EthanolRed cds-NP_012291.1_EthanolRed 99.2 99.7 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005543.1:404634-405737:+ gene-YIR025W_FaliES1 rna-NM_001179547.1_FaliES1 cds-NP_012291.1_FaliES1 99.1 99.7 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000039.1:28427-29533:- gene-YIR025W_JAY291 rna-NM_001179547.1_JAY291 cds-NP_012291.1_JAY291 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005415.1:408840-409943:+ gene-YIR025W_MUCL30387 rna-NM_001179547.1_MUCL30387 cds-NP_012291.1_MUCL30387 99.0 99.7 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005447.1:403458-404561:+ gene-YIR025W_MUCL30388 rna-NM_001179547.1_MUCL30388 cds-NP_012291.1_MUCL30388 99.0 99.7 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005287.1:402989-404092:+ gene-YIR025W_MUCL39482 rna-NM_001179547.1_MUCL39482 cds-NP_012291.1_MUCL39482 99.2 99.7 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005431.1:409302-410405:+ gene-YIR025W_MUCL42920 rna-NM_001179547.1_MUCL42920 cds-NP_012291.1_MUCL42920 99.1 99.7 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011818.1:403659-404765:+ gene-YIR025W_NCIM3186 rna-NM_001179547.1_NCIM3186 cds-NP_012291.1_NCIM3186 99.4 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005271.1:406753-407856:+ gene-YIR025W_NCYC1407 rna-NM_001179547.1_NCYC1407 cds-NP_012291.1_NCYC1407 99.2 99.7 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994148.1:397599-398705:+ gene-YIR025W_PE2H3 rna-NM_001179547.1_PE2H3 cds-NP_012291.1_PE2H3 100.0 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999880.1:392305-393411:+ gene-YIR025W_PE2H4 rna-NM_001179547.1_PE2H4 cds-NP_012291.1_PE2H4 100.0 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001141.2:403659-404765:+ gene-YIR025W_S288C rna-NM_001179547.1_S288C cds-NP_012291.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000097.1:24086-25189:- gene-YIR025W_SA1 rna-NM_001179547.1_SA1 cds-NP_012291.1_SA1 98.7 99.7 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005495.1:401499-402602:+ gene-YIR025W_ThermosaccDry rna-NM_001179547.1_ThermosaccDry cds-NP_012291.1_ThermosaccDry 99.1 99.7 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005463.1:398832-399935:+ gene-YIR025W_VR1 rna-NM_001179547.1_VR1 cds-NP_012291.1_VR1 98.7 99.7 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000020.1:10665-11768:+ gene-YIR025W_ZTW1 rna-NM_001179547.1_ZTW1 cds-NP_012291.1_ZTW1 99.1 99.7 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047495.1:399186-400304:+ gene-YIR025W_Sparadoxus rna-NM_001179547.1_Sparadoxus cds-NP_012291.1_Sparadoxus 89.6 99.6 Verified 1 1 1 False True False False False

Additional files