Gene name: MMS4
Reference locus (S288C): YBR098W
Gene biotype: protein_coding
Description: Crossover junction endonuclease eme1; Subunit of structure-specific Mms4p-Mus81p endonuclease; cleaves branched DNA; involved in recombination, DNA repair, and joint molecule formation/resolution during meiotic recombination; phosphorylation of the non-catalytic subunit Mms4p by Cdc28p and Cdc5p during mitotic cell cycle activates the function of Mms4p-Mus81p
Top 10 interactors (score): MUS81 (0.999); SGS1 (0.992); YEN1 (0.986); RMI1 (0.975); TOP3 (0.971); SLX4 (0.962); SRS2 (0.954); MPH1 (0.947); CDC5 (0.937); RTT107 (0.933); RPM2 (0.9); POP3 (0.9); POP8 (0.9); POP1 (0.9); RPR2 (0.9); SEN2 (0.9); POP7 (0.9); POP4 (0.9); RPP1 (0.9); POP6 (0.9)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005296.1:423878-425953:+ | gene-YBR098W_AKU4011 | rna-NM_001178446.1_AKU4011 | cds-NP_009656.2_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000179.1:414919-416994:+ | gene-YBR098W_BG1 | rna-NM_001178446.1_BG1 | cds-NP_009656.2_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005504.1:425656-427731:+ | gene-YBR098W_Bruggeman | rna-NM_001178446.1_Bruggeman | cds-NP_009656.2_Bruggeman | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005520.1:428426-430501:+ | gene-YBR098W_CAT1 | rna-NM_001178446.1_CAT1 | cds-NP_009656.2_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005360.1:416163-418238:+ | gene-YBR098W_CBS1585 | rna-NM_001178446.1_CBS1585 | cds-NP_009656.2_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005344.1:424285-426360:+ | gene-YBR098W_CBS436 | rna-NM_001178446.1_CBS436 | cds-NP_009656.2_CBS436 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005328.1:514391-516466:+ | gene-YBR098W_CBS6412 | rna-NM_001178446.1_CBS6412 | cds-NP_009656.2_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005312.1:421302-423377:+ | gene-YBR098W_CBS6413 | rna-NM_001178446.1_CBS6413 | cds-NP_009656.2_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001523.1:433415-435490:+ | gene-YBR098W_CENPK1137D | rna-NM_001178446.1_CENPK1137D | cds-NP_009656.2_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005472.1:550672-552747:+ | gene-YBR098W_EthanolRed | rna-NM_001178446.1_EthanolRed | cds-NP_009656.2_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005536.1:439955-442030:+ | gene-YBR098W_FaliES1 | rna-NM_001178446.1_FaliES1 | cds-NP_009656.2_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000312.1:10859-12934:+ | gene-YBR098W_JAY291 | rna-NM_001178446.1_JAY291 | cds-NP_009656.2_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005408.1:427690-429765:+ | gene-YBR098W_MUCL30387 | rna-NM_001178446.1_MUCL30387 | cds-NP_009656.2_MUCL30387 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005440.1:426690-428765:+ | gene-YBR098W_MUCL30388 | rna-NM_001178446.1_MUCL30388 | cds-NP_009656.2_MUCL30388 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005280.1:414306-416381:+ | gene-YBR098W_MUCL39482 | rna-NM_001178446.1_MUCL39482 | cds-NP_009656.2_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005424.1:423370-425445:+ | gene-YBR098W_MUCL42920 | rna-NM_001178446.1_MUCL42920 | cds-NP_009656.2_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011811.1:441312-443387:+ | gene-YBR098W_NCIM3186 | rna-NM_001178446.1_NCIM3186 | cds-NP_009656.2_NCIM3186 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005264.1:417085-419160:+ | gene-YBR098W_NCYC1407 | rna-NM_001178446.1_NCYC1407 | cds-NP_009656.2_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994141.1:429704-431779:+ | gene-YBR098W_PE2H3 | rna-NM_001178446.1_PE2H3 | cds-NP_009656.2_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999873.1:427380-429455:+ | gene-YBR098W_PE2H4 | rna-NM_001178446.1_PE2H4 | cds-NP_009656.2_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001134.8:441515-443590:+ | gene-YBR098W_S288C | rna-NM_001178446.1_S288C | cds-NP_009656.2_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000017.1:34119-36194:- | gene-YBR098W_SA1 | rna-NM_001178446.1_SA1 | cds-NP_009656.2_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005488.1:438962-441037:+ | gene-YBR098W_ThermosaccDry | rna-NM_001178446.1_ThermosaccDry | cds-NP_009656.2_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005456.1:420965-423040:+ | gene-YBR098W_VR1 | rna-NM_001178446.1_VR1 | cds-NP_009656.2_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000003.1:414625-416700:+ | gene-YBR098W_ZTW1 | rna-NM_001178446.1_ZTW1 | cds-NP_009656.2_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047488.1:451501-453579:+ | gene-YBR098W_Sparadoxus | rna-NM_001178446.1_Sparadoxus | cds-NP_009656.2_Sparadoxus | 87.3 | 99.6 | Verified | 1 | 1 | 1 | False | True | False | False | False |