Gene name: MMS22
Reference locus (S288C): YLR320W
Gene biotype: protein_coding
Description: E3 ubiquitin-protein ligase substrate receptor MMS22; Subunit of E3 ubiquitin ligase complex involved in replication repair; stabilizes protein components of the replication fork, such as the fork-pausing complex and leading strand polymerase, preventing fork collapse and promoting efficient recovery during replication stress; required for accurate meiotic chromosome segregation; Belongs to the MMS22 family
Top 10 interactors (score): RTT107 (0.999); MMS1 (0.999); RTT101 (0.999); CTF4 (0.993); HRT1 (0.953); RTT109 (0.932); RAD52 (0.848); HHT1 (0.794); ASF1 (0.773); MRC1 (0.761); SRS2 (0.745); CDC45 (0.734); CSM3 (0.72); RRM3 (0.715); HST3 (0.706); TOF1 (0.685); YLR280C (0.675); RAD18 (0.628); RTT106 (0.616); HHT2 (0.609)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:720394-724758:+ | gene-YLR320W_AKU4011 | rna-NM_001182209.1_AKU4011 | cds-NP_013424.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000170.1:7924-12288:- | gene-YLR320W_BG1 | rna-NM_001182209.1_BG1 | cds-NP_013424.1_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005514.1:756227-760591:+ | gene-YLR320W_Bruggeman | rna-NM_001182209.1_Bruggeman | cds-NP_013424.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:754382-758746:+ | gene-YLR320W_CAT1 | rna-NM_001182209.1_CAT1 | cds-NP_013424.1_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005370.1:755310-759674:+ | gene-YLR320W_CBS1585 | rna-NM_001182209.1_CBS1585 | cds-NP_013424.1_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005354.1:739910-744274:+ | gene-YLR320W_CBS436 | rna-NM_001182209.1_CBS436 | cds-NP_013424.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:793265-797629:+ | gene-YLR320W_CBS6412 | rna-NM_001182209.1_CBS6412 | cds-NP_013424.1_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:755982-760346:+ | gene-YLR320W_CBS6413 | rna-NM_001182209.1_CBS6413 | cds-NP_013424.1_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001533.1:756554-760918:+ | gene-YLR320W_CENPK1137D | rna-NM_001182209.1_CENPK1137D | cds-NP_013424.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005482.1:713677-718041:+ | gene-YLR320W_EthanolRed | rna-NM_001182209.1_EthanolRed | cds-NP_013424.1_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005546.1:742878-747242:+ | gene-YLR320W_FaliES1 | rna-NM_001182209.1_FaliES1 | cds-NP_013424.1_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000296.1:20615-24979:- | gene-YLR320W_JAY291 | rna-NM_001182209.1_JAY291 | cds-NP_013424.1_JAY291 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005418.1:755453-759817:+ | gene-YLR320W_MUCL30387 | rna-NM_001182209.1_MUCL30387 | cds-NP_013424.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005450.1:761039-765403:+ | gene-YLR320W_MUCL30388 | rna-NM_001182209.1_MUCL30388 | cds-NP_013424.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:756551-760915:+ | gene-YLR320W_MUCL39482 | rna-NM_001182209.1_MUCL39482 | cds-NP_013424.1_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005434.1:751702-756066:+ | gene-YLR320W_MUCL42920 | rna-NM_001182209.1_MUCL42920 | cds-NP_013424.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:771914-776278:+ | gene-YLR320W_NCIM3186 | rna-NM_001182209.1_NCIM3186 | cds-NP_013424.1_NCIM3186 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:765891-770255:+ | gene-YLR320W_NCYC1407 | rna-NM_001182209.1_NCYC1407 | cds-NP_013424.1_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:753674-758038:+ | gene-YLR320W_PE2H3 | rna-NM_001182209.1_PE2H3 | cds-NP_013424.1_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:753418-757782:+ | gene-YLR320W_PE2H4 | rna-NM_001182209.1_PE2H4 | cds-NP_013424.1_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:771940-776304:+ | gene-YLR320W_S288C | rna-NM_001182209.1_S288C | cds-NP_013424.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000039.1:8005-12369:- | gene-YLR320W_SA1 | rna-NM_001182209.1_SA1 | cds-NP_013424.1_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005498.1:744770-749134:+ | gene-YLR320W_ThermosaccDry | rna-NM_001182209.1_ThermosaccDry | cds-NP_013424.1_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005466.1:756890-761254:+ | gene-YLR320W_VR1 | rna-NM_001182209.1_VR1 | cds-NP_013424.1_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000025.1:83185-87548:+ | gene-YLR320W_ZTW1 | rna-NM_001182209.1_ZTW1 | cds-NP_013424.1_ZTW1 | 99.7 | 99.9 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047498.1:730922-735292:+ | gene-YLR320W_Sparadoxus | rna-NM_001182209.1_Sparadoxus | cds-NP_013424.1_Sparadoxus | 86.3 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |