Gene name: MMS1
Reference locus (S288C): YPR164W
Gene biotype: protein_coding
Description: Subunit of E3 ubiquitin ligase complex involved in replication repair; stabilizes protein components of the replication fork such as the fork-pausing complex and leading strand polymerase, preventing fork collapse and promoting efficient recovery during replication stress; regulates Ty1 transposition; involved with Rtt101p in nonfunctional rRNA decay
Top 10 interactors (score): MMS22 (0.999); RTT101 (0.999); RTT107 (0.995); HRT1 (0.967); MRC1 (0.896); CTF4 (0.855); SRS2 (0.85); RAD52 (0.827); RTT109 (0.824); SGS1 (0.824); RRM3 (0.809); RAD51 (0.8); CRT10 (0.764); ASF1 (0.751); MAG1 (0.741); RAD59 (0.721); RTT106 (0.713); CSM3 (0.7); HHT1 (0.687); SLX4 (0.68)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005310.1:824979-829202:+ | gene-YPR164W_AKU4011 | rna-NM_001184261.1_AKU4011 | cds-NP_015490.1_AKU4011 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000091.1:68514-72737:- | gene-YPR164W_BG1 | rna-NM_001184261.1_BG1 | cds-NP_015490.1_BG1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005518.1:905171-909394:+ | gene-YPR164W_Bruggeman | rna-NM_001184261.1_Bruggeman | cds-NP_015490.1_Bruggeman | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005534.1:947778-952001:+ | gene-YPR164W_CAT1 | rna-NM_001184261.1_CAT1 | cds-NP_015490.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005374.1:829779-834002:+ | gene-YPR164W_CBS1585 | rna-NM_001184261.1_CBS1585 | cds-NP_015490.1_CBS1585 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005358.1:843334-847557:+ | gene-YPR164W_CBS436 | rna-NM_001184261.1_CBS436 | cds-NP_015490.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005342.1:831565-835788:+ | gene-YPR164W_CBS6412 | rna-NM_001184261.1_CBS6412 | cds-NP_015490.1_CBS6412 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005326.1:826709-830932:+ | gene-YPR164W_CBS6413 | rna-NM_001184261.1_CBS6413 | cds-NP_015490.1_CBS6413 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001537.1:870752-874975:+ | gene-YPR164W_CENPK1137D | rna-NM_001184261.1_CENPK1137D | cds-NP_015490.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:1146613-1150836:+ | gene-YPR164W_EthanolRed | rna-NM_001184261.1_EthanolRed | cds-NP_015490.1_EthanolRed | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005550.1:826319-830542:+ | gene-YPR164W_FaliES1 | rna-NM_001184261.1_FaliES1 | cds-NP_015490.1_FaliES1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000081.1:14111-18334:+ | gene-YPR164W_JAY291 | rna-NM_001184261.1_JAY291 | cds-NP_015490.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005422.1:873256-877479:+ | gene-YPR164W_MUCL30387 | rna-NM_001184261.1_MUCL30387 | cds-NP_015490.1_MUCL30387 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005454.1:846083-850306:+ | gene-YPR164W_MUCL30388 | rna-NM_001184261.1_MUCL30388 | cds-NP_015490.1_MUCL30388 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005294.1:821981-826204:+ | gene-YPR164W_MUCL39482 | rna-NM_001184261.1_MUCL39482 | cds-NP_015490.1_MUCL39482 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005438.1:885643-889866:+ | gene-YPR164W_MUCL42920 | rna-NM_001184261.1_MUCL42920 | cds-NP_015490.1_MUCL42920 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011825.1:870686-874909:+ | gene-YPR164W_NCIM3186 | rna-NM_001184261.1_NCIM3186 | cds-NP_015490.1_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005278.1:830342-834565:+ | gene-YPR164W_NCYC1407 | rna-NM_001184261.1_NCYC1407 | cds-NP_015490.1_NCYC1407 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994155.1:842635-846858:+ | gene-YPR164W_PE2H3 | rna-NM_001184261.1_PE2H3 | cds-NP_015490.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999887.1:842283-846506:+ | gene-YPR164W_PE2H4 | rna-NM_001184261.1_PE2H4 | cds-NP_015490.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001148.4:870703-874926:+ | gene-YPR164W_S288C | rna-NM_001184261.1_S288C | cds-NP_015490.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000060.1:51234-55457:- | gene-YPR164W_SA1 | rna-NM_001184261.1_SA1 | cds-NP_015490.1_SA1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005502.1:826007-830230:+ | gene-YPR164W_ThermosaccDry | rna-NM_001184261.1_ThermosaccDry | cds-NP_015490.1_ThermosaccDry | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005470.1:854290-858513:+ | gene-YPR164W_VR1 | rna-NM_001184261.1_VR1 | cds-NP_015490.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000033.1:829051-833274:+ | gene-YPR164W_ZTW1 | rna-NM_001184261.1_ZTW1 | cds-NP_015490.1_ZTW1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047502.1:831205-835431:+ | gene-YPR164W_Sparadoxus | rna-NM_001184261.1_Sparadoxus | cds-NP_015490.1_Sparadoxus | 86.1 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |