MMP1 (YLL061W)


Gene profile

Gene name: MMP1
Reference locus (S288C): YLL061W
Gene biotype: protein_coding

Description: High-affinity S-methylmethionine permease; required for utilization of S-methylmethionine as a sulfur source; has similarity to S-adenosylmethionine permease Sam3p

Top 10 interactors (score): MHT1 (0.992); YLL059C (0.843); MUP1 (0.754); YLL058W (0.711); UBP11 (0.619); MUP3 (0.618); YLL056C (0.616); PMT7 (0.614); ERC1 (0.596); SAM1 (0.58); MET22 (0.573); MET8 (0.57); JLP1 (0.565); MET14 (0.561); MET32 (0.534); VBA4 (0.531); STR3 (0.528); PMP3 (0.502); YCR023C (0.483); FLC2 (0.482)

Homologues (species, bitscore): slc7a10b (Danio rerio, 57.8); slc7a14 (Xenopus tropicalis, 51.6); CG12531 (Drosophila melanogaster, 59.3); At5g36940 (Arabidopsis thaliana, 54.7)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005306.1:4769-6520:+ gene-YLL061W_AKU4011 rna-NM_001181881.1_AKU4011 cds-NP_013039.1_AKU4011 98.8 100.0 Unannotated 1 1 0 False False False False True
BG1 GCA_001932575.1 Bioethanol South America MSHP01000093.1:8954-10705:- gene-YLL061W_BG1 rna-NM_001181881.1_BG1 cds-NP_013039.1_BG1 99.5 100.0 Verified 1 1 1 True True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005514.1:13886-15637:+ gene-YLL061W_Bruggeman rna-NM_001181881.1_Bruggeman cds-NP_013039.1_Bruggeman 99.6 100.0 Verified 1 1 1 True True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005530.1:15613-17364:+ gene-YLL061W_CAT1 rna-NM_001181881.1_CAT1 cds-NP_013039.1_CAT1 99.5 100.0 Verified 1 1 1 True True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005370.1:12666-14417:+ gene-YLL061W_CBS1585 rna-NM_001181881.1_CBS1585 cds-NP_013039.1_CBS1585 98.8 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005354.1:3056-4807:+ gene-YLL061W_CBS436 rna-NM_001181881.1_CBS436 cds-NP_013039.1_CBS436 99.4 100.0 Unannotated 1 1 0 False False False False True
CBS6412 GCA_001738345.1 Sake Asia CM005338.1:12713-14464:+ gene-YLL061W_CBS6412 rna-NM_001181881.1_CBS6412 cds-NP_013039.1_CBS6412 98.6 100.0 Unannotated 1 1 0 False False False False True
CBS6413 GCA_001738265.1 Sake Asia CM005322.1:12477-14228:+ gene-YLL061W_CBS6413 rna-NM_001181881.1_CBS6413 cds-NP_013039.1_CBS6413 98.5 100.0 Unannotated 1 1 0 False False False False True
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001533.1:2917-4668:+ gene-YLL061W_CENPK1137D rna-NM_001181881.1_CENPK1137D cds-NP_013039.1_CENPK1137D 99.4 100.0 Unannotated 1 1 0 False False False False True
EthanolRed GCA_001738615.1 Bioethanol Asia CM005482.1:5589-7340:+ gene-YLL061W_EthanolRed rna-NM_001181881.1_EthanolRed cds-NP_013039.1_EthanolRed 98.8 100.0 Unannotated 1 1 0 False False False False True
FaliES1 GCA_001738715.1 Bioethanol Asia CM005546.1:4679-6430:+ gene-YLL061W_FaliES1 rna-NM_001181881.1_FaliES1 cds-NP_013039.1_FaliES1 98.8 100.0 Unannotated 1 1 0 False False False False True
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000073.1:4180-5931:+ gene-YLL061W_JAY291 rna-NM_001181881.1_JAY291 cds-NP_013039.1_JAY291 99.5 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005418.1:12790-14541:+ gene-YLL061W_MUCL30387 rna-NM_001181881.1_MUCL30387 cds-NP_013039.1_MUCL30387 99.6 100.0 Verified 1 1 1 True True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005450.1:16299-18050:+ gene-YLL061W_MUCL30388 rna-NM_001181881.1_MUCL30388 cds-NP_013039.1_MUCL30388 99.6 100.0 Verified 1 1 1 True True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005290.1:12668-14419:+ gene-YLL061W_MUCL39482 rna-NM_001181881.1_MUCL39482 cds-NP_013039.1_MUCL39482 98.8 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005434.1:13096-14847:+ gene-YLL061W_MUCL42920 rna-NM_001181881.1_MUCL42920 cds-NP_013039.1_MUCL42920 99.4 100.0 Unannotated 1 1 0 False False False False True
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011821.1:17930-19681:+ gene-YLL061W_NCIM3186 rna-NM_001181881.1_NCIM3186 cds-NP_013039.1_NCIM3186 98.9 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005274.1:4521-6262:+ gene-YLL061W_NCYC1407 rna-NM_001181881.1_NCYC1407 cds-NP_013039.1_NCYC1407 98.2 99.4 Unannotated 1 1 0 False False False True False
PE2H3 GCA_905220325.1 Bioethanol South America HG994151.1:11585-13336:+ gene-YLL061W_PE2H3 rna-NM_001181881.1_PE2H3 cds-NP_013039.1_PE2H3 99.5 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999883.1:11382-13133:+ gene-YLL061W_PE2H4 rna-NM_001181881.1_PE2H4 cds-NP_013039.1_PE2H4 99.5 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001144.5:17956-19707:+ gene-YLL061W_S288C rna-NM_001181881.1_S288C cds-NP_013039.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000047.1:11217-12968:+ gene-YLL061W_SA1 rna-NM_001181881.1_SA1 cds-NP_013039.1_SA1 99.5 100.0 Verified 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005498.1:5216-6967:+ gene-YLL061W_ThermosaccDry rna-NM_001181881.1_ThermosaccDry cds-NP_013039.1_ThermosaccDry 98.8 100.0 Unannotated 1 1 0 False False False False True
VR1 GCA_001738595.1 Bioethanol South America CM005466.1:17281-19032:+ gene-YLL061W_VR1 rna-NM_001181881.1_VR1 cds-NP_013039.1_VR1 99.6 100.0 Verified 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000023.1:4878-6630:+ gene-YLL061W_ZTW1 rna-NM_001181881.1_ZTW1 cds-NP_013039.1_ZTW1 99.5 100.0 Unannotated 1 1 0 False False False True False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047498.1:12921-14672:+ gene-YLL061W_Sparadoxus rna-NM_001181881.1_Sparadoxus cds-NP_013039.1_Sparadoxus 90.5 100.0 Verified 1 1 1 False True False False False

Additional files