Gene name: MMF1
Reference locus (S288C): YIL051C
Gene biotype: protein_coding
Description: Mitochondrial protein required for transamination of isoleucine; but not of valine or leucine; may regulate specificity of branched-chain transaminases Bat1p and Bat2p; induction of expression in response to stress is mediated by a Hog1p-regulated antisense RNA and gene looping; interacts genetically with mitochondrial ribosomal protein genes; MMF1 has a paralog, HMF1, that arose from the whole genome duplication
Top 10 interactors (score): SHM1 (0.766); MAM33 (0.739); LIH1 (0.659); YIL060W (0.653); PEP4 (0.651); MRPL38 (0.65); MCX1 (0.649); MRPL40 (0.648); REX2 (0.613); AIM45 (0.596); CHA1 (0.592); ARF2 (0.579); ILV1 (0.576); AIM19 (0.57); MRX14 (0.568); EMI2 (0.566); TKL2 (0.565); PHO92 (0.561); MRX3 (0.552); TKL1 (0.549)
Homologues (species, bitscore): HRSP12 (Homo sapiens, 90.9); Hrsp12 (Mus musculus, 94.0); hrsp12 (Danio rerio, 74.3); UK114 (Drosophila melanogaster, 86.7); C23G10.2 (Caenorhabditis elegans, 83.6); AT3G20390 (Arabidopsis thaliana, 103.2)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005303.1:254675-255112:- | gene-YIL051C_AKU4011 | rna-NM_001179401.3_AKU4011 | cds-NP_012213.3_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000164.1:116111-116548:- | gene-YIL051C_BG1 | rna-NM_001179401.3_BG1 | cds-NP_012213.3_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005511.1:260926-261363:- | gene-YIL051C_Bruggeman | rna-NM_001179401.3_Bruggeman | cds-NP_012213.3_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005527.1:248588-249025:- | gene-YIL051C_CAT1 | rna-NM_001179401.3_CAT1 | cds-NP_012213.3_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005367.1:254500-254937:- | gene-YIL051C_CBS1585 | rna-NM_001179401.3_CBS1585 | cds-NP_012213.3_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005351.1:249798-250235:- | gene-YIL051C_CBS436 | rna-NM_001179401.3_CBS436 | cds-NP_012213.3_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005335.1:251115-251552:- | gene-YIL051C_CBS6412 | rna-NM_001179401.3_CBS6412 | cds-NP_012213.3_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005319.1:246666-247103:- | gene-YIL051C_CBS6413 | rna-NM_001179401.3_CBS6413 | cds-NP_012213.3_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001530.1:249550-249987:- | gene-YIL051C_CENPK1137D | rna-NM_001179401.3_CENPK1137D | cds-NP_012213.3_CENPK1137D | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005479.1:238589-239026:- | gene-YIL051C_EthanolRed | rna-NM_001179401.3_EthanolRed | cds-NP_012213.3_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005543.1:256128-256565:- | gene-YIL051C_FaliES1 | rna-NM_001179401.3_FaliES1 | cds-NP_012213.3_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000365.1:42314-42751:+ | gene-YIL051C_JAY291 | rna-NM_001179401.3_JAY291 | cds-NP_012213.3_JAY291 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005415.1:257818-258255:- | gene-YIL051C_MUCL30387 | rna-NM_001179401.3_MUCL30387 | cds-NP_012213.3_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005447.1:254421-254858:- | gene-YIL051C_MUCL30388 | rna-NM_001179401.3_MUCL30388 | cds-NP_012213.3_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005287.1:255343-255780:- | gene-YIL051C_MUCL39482 | rna-NM_001179401.3_MUCL39482 | cds-NP_012213.3_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005431.1:258474-258911:- | gene-YIL051C_MUCL42920 | rna-NM_001179401.3_MUCL42920 | cds-NP_012213.3_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011818.1:257843-258280:- | gene-YIL051C_NCIM3186 | rna-NM_001179401.3_NCIM3186 | cds-NP_012213.3_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005271.1:259616-260053:- | gene-YIL051C_NCYC1407 | rna-NM_001179401.3_NCYC1407 | cds-NP_012213.3_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994148.1:252858-253295:- | gene-YIL051C_PE2H3 | rna-NM_001179401.3_PE2H3 | cds-NP_012213.3_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999880.1:247570-248007:- | gene-YIL051C_PE2H4 | rna-NM_001179401.3_PE2H4 | cds-NP_012213.3_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001141.2:257843-258280:- | gene-YIL051C_S288C | rna-NM_001179401.3_S288C | cds-NP_012213.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000031.1:67889-68326:+ | gene-YIL051C_SA1 | rna-NM_001179401.3_SA1 | cds-NP_012213.3_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005495.1:254797-255234:- | gene-YIL051C_ThermosaccDry | rna-NM_001179401.3_ThermosaccDry | cds-NP_012213.3_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005463.1:251975-252412:- | gene-YIL051C_VR1 | rna-NM_001179401.3_VR1 | cds-NP_012213.3_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000019.1:228640-229077:- | gene-YIL051C_ZTW1 | rna-NM_001179401.3_ZTW1 | cds-NP_012213.3_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047495.1:250761-251198:- | gene-YIL051C_Sparadoxus | rna-NM_001179401.3_Sparadoxus | cds-NP_012213.3_Sparadoxus | 92.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |