Gene name: MLP2
Reference locus (S288C): YIL149C
Gene biotype: protein_coding
Description: Nucleoprotein tpr; Myosin-like protein associated with the nuclear envelope; nuclear basket protein that connects the nuclear pore complex with the nuclear interior; involved in the Tel1p pathway that controls telomere length; MLP2 has a paralog, MLP1, that arose from the whole genome duplication
Top 10 interactors (score): NUP2 (0.999); NSP1 (0.998); NUP60 (0.998); NUP1 (0.996); MLP1 (0.994); NIC96 (0.988); NUP53 (0.982); MEX67 (0.961); NUP133 (0.958); ULP1 (0.955); NUP192 (0.954); NUP84 (0.951); YRA1 (0.949); NUP159 (0.948); SEH1 (0.945); NUP157 (0.945); MAD1 (0.945); NUP145 (0.93); ASM4 (0.926); NUP85 (0.926)
Homologues (species, bitscore): TPR (Homo sapiens, 61.2); Tpr (Mus musculus, 63.2); tpr (Xenopus tropicalis, 59.3); Mtor (Drosophila melanogaster, 52.8)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005303.1:64249-69288:- | gene-YIL149C_AKU4011 | rna-NM_001179497.3_AKU4011 | cds-NP_012117.3_AKU4011 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000174.1:68079-73118:+ | gene-YIL149C_BG1 | rna-NM_001179497.3_BG1 | cds-NP_012117.3_BG1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005511.1:67009-72048:- | gene-YIL149C_Bruggeman | rna-NM_001179497.3_Bruggeman | cds-NP_012117.3_Bruggeman | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005527.1:60816-65855:- | gene-YIL149C_CAT1 | rna-NM_001179497.3_CAT1 | cds-NP_012117.3_CAT1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005367.1:64452-69491:- | gene-YIL149C_CBS1585 | rna-NM_001179497.3_CBS1585 | cds-NP_012117.3_CBS1585 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005351.1:55588-60627:- | gene-YIL149C_CBS436 | rna-NM_001179497.3_CBS436 | cds-NP_012117.3_CBS436 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005335.1:61981-67020:- | gene-YIL149C_CBS6412 | rna-NM_001179497.3_CBS6412 | cds-NP_012117.3_CBS6412 | 99.1 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005319.1:56136-61175:- | gene-YIL149C_CBS6413 | rna-NM_001179497.3_CBS6413 | cds-NP_012117.3_CBS6413 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001530.1:54733-59772:- | gene-YIL149C_CENPK1137D | rna-NM_001179497.3_CENPK1137D | cds-NP_012117.3_CENPK1137D | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005479.1:49782-54821:- | gene-YIL149C_EthanolRed | rna-NM_001179497.3_EthanolRed | cds-NP_012117.3_EthanolRed | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005543.1:65585-70624:- | gene-YIL149C_FaliES1 | rna-NM_001179497.3_FaliES1 | cds-NP_012117.3_FaliES1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000319.1:37731-42770:+ | gene-YIL149C_JAY291 | rna-NM_001179497.3_JAY291 | cds-NP_012117.3_JAY291 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005415.1:64765-69804:- | gene-YIL149C_MUCL30387 | rna-NM_001179497.3_MUCL30387 | cds-NP_012117.3_MUCL30387 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005447.1:64013-69052:- | gene-YIL149C_MUCL30388 | rna-NM_001179497.3_MUCL30388 | cds-NP_012117.3_MUCL30388 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005287.1:65377-70416:- | gene-YIL149C_MUCL39482 | rna-NM_001179497.3_MUCL39482 | cds-NP_012117.3_MUCL39482 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005431.1:68578-73617:- | gene-YIL149C_MUCL42920 | rna-NM_001179497.3_MUCL42920 | cds-NP_012117.3_MUCL42920 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011818.1:63028-68067:- | gene-YIL149C_NCIM3186 | rna-NM_001179497.3_NCIM3186 | cds-NP_012117.3_NCIM3186 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005271.1:69342-74381:- | gene-YIL149C_NCYC1407 | rna-NM_001179497.3_NCYC1407 | cds-NP_012117.3_NCYC1407 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994148.1:63961-69000:- | gene-YIL149C_PE2H3 | rna-NM_001179497.3_PE2H3 | cds-NP_012117.3_PE2H3 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999880.1:57923-62962:- | gene-YIL149C_PE2H4 | rna-NM_001179497.3_PE2H4 | cds-NP_012117.3_PE2H4 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001141.2:63028-68067:- | gene-YIL149C_S288C | rna-NM_001179497.3_S288C | cds-NP_012117.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000050.1:41605-46644:- | gene-YIL149C_SA1 | rna-NM_001179497.3_SA1 | cds-NP_012117.3_SA1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005495.1:64195-69234:- | gene-YIL149C_ThermosaccDry | rna-NM_001179497.3_ThermosaccDry | cds-NP_012117.3_ThermosaccDry | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005463.1:61347-66386:- | gene-YIL149C_VR1 | rna-NM_001179497.3_VR1 | cds-NP_012117.3_VR1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000019.1:39181-44220:- | gene-YIL149C_ZTW1 | rna-NM_001179497.3_ZTW1 | cds-NP_012117.3_ZTW1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047495.1:56905-61944:- | gene-YIL149C_Sparadoxus | rna-NM_001179497.3_Sparadoxus | cds-NP_012117.3_Sparadoxus | 84.9 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |