Gene name: MLP1
Reference locus (S288C): YKR095W
Gene biotype: protein_coding
Description: Nucleoprotein tpr; Myosin-like protein associated with the nuclear envelope; nuclear basket protein that connects the nuclear pore complex with the nuclear interior; involved with Tel1p in telomere length control; involved with Pml1p and Pml39p in nuclear retention of unspliced mRNAs; MLP1 has a paralog, MLP2, that arose from the whole genome duplication
Top 10 interactors (score): MEX67 (0.997); NSP1 (0.996); NUP2 (0.996); MLP2 (0.994); YRA1 (0.993); NUP1 (0.993); NUP60 (0.992); NAB2 (0.985); NIC96 (0.975); GLE2 (0.968); NUP145 (0.955); SEH1 (0.949); SMT3 (0.945); NUP53 (0.942); MAD1 (0.941); NUP133 (0.935); NUP85 (0.935); NUP84 (0.931); SSA1 (0.927); SSA2 (0.927)
Homologues (species, bitscore): TPR (Homo sapiens, 158.3); Tpr (Mus musculus, 166.4); tprb (Danio rerio, 167.5); tpr (Xenopus tropicalis, 164.1); Mtor (Drosophila melanogaster, 63.9); NUA (Arabidopsis thaliana, 85.5)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005305.1:605742-611366:+ | gene-YKR095W_AKU4011 | rna-NM_001179885.1_AKU4011 | cds-NP_013021.1_AKU4011 | 99.6 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000113.1:32773-38400:- | gene-YKR095W_BG1 | rna-NM_001179885.1_BG1 | cds-NP_013021.1_BG1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005513.1:628353-633980:+ | gene-YKR095W_Bruggeman | rna-NM_001179885.1_Bruggeman | cds-NP_013021.1_Bruggeman | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005529.1:625638-631265:+ | gene-YKR095W_CAT1 | rna-NM_001179885.1_CAT1 | cds-NP_013021.1_CAT1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005369.1:618229-623856:+ | gene-YKR095W_CBS1585 | rna-NM_001179885.1_CBS1585 | cds-NP_013021.1_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005353.1:616639-622266:+ | gene-YKR095W_CBS436 | rna-NM_001179885.1_CBS436 | cds-NP_013021.1_CBS436 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005337.1:601518-607145:+ | gene-YKR095W_CBS6412 | rna-NM_001179885.1_CBS6412 | cds-NP_013021.1_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005321.1:618048-623675:+ | gene-YKR095W_CBS6413 | rna-NM_001179885.1_CBS6413 | cds-NP_013021.1_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001532.1:619463-625090:+ | gene-YKR095W_CENPK1137D | rna-NM_001179885.1_CENPK1137D | cds-NP_013021.1_CENPK1137D | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005481.1:615632-621259:+ | gene-YKR095W_EthanolRed | rna-NM_001179885.1_EthanolRed | cds-NP_013021.1_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005545.1:619528-625155:+ | gene-YKR095W_FaliES1 | rna-NM_001179885.1_FaliES1 | cds-NP_013021.1_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000426.1:19817-25444:- | gene-YKR095W_JAY291 | rna-NM_001179885.1_JAY291 | cds-NP_013021.1_JAY291 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005417.1:627870-633497:+ | gene-YKR095W_MUCL30387 | rna-NM_001179885.1_MUCL30387 | cds-NP_013021.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005449.1:622180-627807:+ | gene-YKR095W_MUCL30388 | rna-NM_001179885.1_MUCL30388 | cds-NP_013021.1_MUCL30388 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005289.1:617070-622694:+ | gene-YKR095W_MUCL39482 | rna-NM_001179885.1_MUCL39482 | cds-NP_013021.1_MUCL39482 | 99.6 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005433.1:623126-628753:+ | gene-YKR095W_MUCL42920 | rna-NM_001179885.1_MUCL42920 | cds-NP_013021.1_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011820.1:619794-625421:+ | gene-YKR095W_NCIM3186 | rna-NM_001179885.1_NCIM3186 | cds-NP_013021.1_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005273.1:617483-623110:+ | gene-YKR095W_NCYC1407 | rna-NM_001179885.1_NCYC1407 | cds-NP_013021.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994150.1:642731-648358:+ | gene-YKR095W_PE2H3 | rna-NM_001179885.1_PE2H3 | cds-NP_013021.1_PE2H3 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999882.1:627173-632800:+ | gene-YKR095W_PE2H4 | rna-NM_001179885.1_PE2H4 | cds-NP_013021.1_PE2H4 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001143.9:619805-625432:+ | gene-YKR095W_S288C | rna-NM_001179885.1_S288C | cds-NP_013021.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000029.1:56380-62007:- | gene-YKR095W_SA1 | rna-NM_001179885.1_SA1 | cds-NP_013021.1_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005497.1:618774-624401:+ | gene-YKR095W_ThermosaccDry | rna-NM_001179885.1_ThermosaccDry | cds-NP_013021.1_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005465.1:618035-623662:+ | gene-YKR095W_VR1 | rna-NM_001179885.1_VR1 | cds-NP_013021.1_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000022.1:615741-621368:+ | gene-YKR095W_ZTW1 | rna-NM_001179885.1_ZTW1 | cds-NP_013021.1_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047497.1:641093-646722:+ | gene-YKR095W_Sparadoxus | rna-NM_001179885.1_Sparadoxus | cds-NP_013021.1_Sparadoxus | 86.1 | 99.9 | Verified | 1 | 1 | 0 | False | False | False | True | False |