MIT1 (YEL007W)


Gene profile

Gene name: MIT1
Reference locus (S288C): YEL007W
Gene biotype: protein_coding

Description: Gti1/Pac2 family transcription factor; Transcriptional regulator of pseudohyphal growth; protein with sequence similarity to S. pombe gti1+ (gluconate transport inducer 1) and C. albicans Wor1

Top 10 interactors (score): SGE1 (0.752); YEL008W (0.745); MFG1 (0.712); MXR1 (0.711); RCH1 (0.654); CSH1 (0.647); YOR034C-A (0.618); YBL029W (0.618); TMS1 (0.617); TRM2 (0.596); YGR161W-C (0.572); YIL014C-A (0.571); DSC3 (0.57); STB6 (0.569); NRG1 (0.566); AIM32 (0.561); NUP42 (0.528); NNR1 (0.525); DRN1 (0.525); PRM1 (0.525)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005299.1:135582-137573:+ gene-YEL007W_AKU4011 rna-NM_001178822.1_AKU4011 cds-NP_010909.1_AKU4011 99.1 99.5 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000011.1:288097-290067:- gene-YEL007W_BG1 rna-NM_001178822.1_BG1 cds-NP_010909.1_BG1 98.1 98.5 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005507.1:142102-144105:+ gene-YEL007W_Bruggeman rna-NM_001178822.1_Bruggeman cds-NP_010909.1_Bruggeman 99.7 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005523.1:138532-140502:+ gene-YEL007W_CAT1 rna-NM_001178822.1_CAT1 cds-NP_010909.1_CAT1 98.1 98.5 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005363.1:135894-137882:+ gene-YEL007W_CBS1585 rna-NM_001178822.1_CBS1585 cds-NP_010909.1_CBS1585 98.9 99.4 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005347.1:137158-139161:+ gene-YEL007W_CBS436 rna-NM_001178822.1_CBS436 cds-NP_010909.1_CBS436 99.7 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005331.1:135800-137776:+ gene-YEL007W_CBS6412 rna-NM_001178822.1_CBS6412 cds-NP_010909.1_CBS6412 98.2 98.8 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005315.1:140436-142424:+ gene-YEL007W_CBS6413 rna-NM_001178822.1_CBS6413 cds-NP_010909.1_CBS6413 98.9 99.4 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001526.1:139719-141719:+ gene-YEL007W_CENPK1137D rna-NM_001178822.1_CENPK1137D cds-NP_010909.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005475.1:136249-138240:+ gene-YEL007W_EthanolRed rna-NM_001178822.1_EthanolRed cds-NP_010909.1_EthanolRed 99.1 99.5 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005539.1:136507-138498:+ gene-YEL007W_FaliES1 rna-NM_001178822.1_FaliES1 cds-NP_010909.1_FaliES1 99.1 99.5 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000024.1:3506-5476:+ gene-YEL007W_JAY291 rna-NM_001178822.1_JAY291 cds-NP_010909.1_JAY291 98.1 98.5 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005411.1:139804-141807:+ gene-YEL007W_MUCL30387 rna-NM_001178822.1_MUCL30387 cds-NP_010909.1_MUCL30387 99.7 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005443.1:136365-138329:+ gene-YEL007W_MUCL30388 rna-NM_001178822.1_MUCL30388 cds-NP_010909.1_MUCL30388 93.9 96.1 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005283.1:134927-136918:+ gene-YEL007W_MUCL39482 rna-NM_001178822.1_MUCL39482 cds-NP_010909.1_MUCL39482 99.0 99.5 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005427.1:139511-141514:+ gene-YEL007W_MUCL42920 rna-NM_001178822.1_MUCL42920 cds-NP_010909.1_MUCL42920 99.7 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011814.1:141891-143891:+ gene-YEL007W_NCIM3186 rna-NM_001178822.1_NCIM3186 cds-NP_010909.1_NCIM3186 99.6 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005267.1:140003-141994:+ gene-YEL007W_NCYC1407 rna-NM_001178822.1_NCYC1407 cds-NP_010909.1_NCYC1407 99.1 99.5 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994144.1:144334-146304:+ gene-YEL007W_PE2H3 rna-NM_001178822.1_PE2H3 cds-NP_010909.1_PE2H3 98.1 98.5 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999876.1:140249-142219:+ gene-YEL007W_PE2H4 rna-NM_001178822.1_PE2H4 cds-NP_010909.1_PE2H4 98.1 98.5 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001137.3:141892-143892:+ gene-YEL007W_S288C rna-NM_001178822.1_S288C cds-NP_010909.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000020.1:99699-101678:- gene-YEL007W_SA1 rna-NM_001178822.1_SA1 cds-NP_010909.1_SA1 98.6 98.9 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005491.1:136913-138904:+ gene-YEL007W_ThermosaccDry rna-NM_001178822.1_ThermosaccDry cds-NP_010909.1_ThermosaccDry 99.1 99.5 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005459.1:136425-138395:+ gene-YEL007W_VR1 rna-NM_001178822.1_VR1 cds-NP_010909.1_VR1 98.1 98.5 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000009.1:134931-136931:+ gene-YEL007W_ZTW1 rna-NM_001178822.1_ZTW1 cds-NP_010909.1_ZTW1 99.7 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047491.1:139681-141630:+ gene-YEL007W_Sparadoxus rna-NM_001178822.1_Sparadoxus cds-NP_010909.1_Sparadoxus 89.2 97.3 Verified 1 1 1 False True False False False

Additional files