MIN4 (YML007C-A)


Gene profile

Gene name: MIN4
Reference locus (S288C): YML007C-A
Gene biotype: protein_coding

Description: Uncharacterized protein YML007C-A, mitochondrial; Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to mitochondria

Top 10 interactors (score): YDR193W (0.897); YDR124W (0.867); GOT1 (0.775); YCL049C (0.76); SRP40 (0.749); PUG1 (0.747); PMP2 (0.745); PMP3 (0.711); PHS1 (0.672); DDR48 (0.62); GRE1 (0.567); YJR015W (0.453); YPR089W (0.45)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005307.1:302716-302826:- gene-YML007C-A_AKU4011 rna-NM_001184487.1_AKU4011 cds-NP_076904.1_AKU4011 100.0 100.0 Mismatch 1 1 1 True True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000201.1:239985-240095:+ gene-YML007C-A_BG1 rna-NM_001184487.1_BG1 cds-NP_076904.1_BG1 100.0 100.0 Mismatch 1 1 1 True True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005515.1:242698-242808:- gene-YML007C-A_Bruggeman rna-NM_001184487.1_Bruggeman cds-NP_076904.1_Bruggeman 100.0 100.0 Mismatch 1 1 1 True True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005531.1:245212-245322:- gene-YML007C-A_CAT1 rna-NM_001184487.1_CAT1 cds-NP_076904.1_CAT1 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005371.1:235695-235805:- gene-YML007C-A_CBS1585 rna-NM_001184487.1_CBS1585 cds-NP_076904.1_CBS1585 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS436 GCA_001738355.1 Sake Asia CM005355.1:241226-241336:- gene-YML007C-A_CBS436 rna-NM_001184487.1_CBS436 cds-NP_076904.1_CBS436 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005339.1:349428-349538:- gene-YML007C-A_CBS6412 rna-NM_001184487.1_CBS6412 cds-NP_076904.1_CBS6412 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005323.1:234950-235060:- gene-YML007C-A_CBS6413 rna-NM_001184487.1_CBS6413 cds-NP_076904.1_CBS6413 100.0 100.0 Mismatch 1 1 1 True True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001534.1:247893-248003:- gene-YML007C-A_CENPK1137D rna-NM_001184487.1_CENPK1137D cds-NP_076904.1_CENPK1137D 100.0 100.0 Mismatch 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005483.1:235729-235839:- gene-YML007C-A_EthanolRed rna-NM_001184487.1_EthanolRed cds-NP_076904.1_EthanolRed 100.0 100.0 Mismatch 1 1 1 True True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005547.1:238695-238805:- gene-YML007C-A_FaliES1 rna-NM_001184487.1_FaliES1 cds-NP_076904.1_FaliES1 100.0 100.0 Mismatch 1 1 1 True True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000033.1:198117-198227:+ gene-YML007C-A_JAY291 rna-NM_001184487.1_JAY291 cds-NP_076904.1_JAY291 100.0 100.0 Mismatch 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005419.1:240434-240544:- gene-YML007C-A_MUCL30387 rna-NM_001184487.1_MUCL30387 cds-NP_076904.1_MUCL30387 100.0 100.0 Mismatch 1 1 1 True True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005451.1:245095-245205:- gene-YML007C-A_MUCL30388 rna-NM_001184487.1_MUCL30388 cds-NP_076904.1_MUCL30388 100.0 100.0 Mismatch 1 1 1 True True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005291.1:235975-236085:- gene-YML007C-A_MUCL39482 rna-NM_001184487.1_MUCL39482 cds-NP_076904.1_MUCL39482 100.0 100.0 Mismatch 1 1 1 True True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005435.1:241541-241651:- gene-YML007C-A_MUCL42920 rna-NM_001184487.1_MUCL42920 cds-NP_076904.1_MUCL42920 100.0 100.0 Mismatch 1 1 1 True True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011822.1:253116-253226:- gene-YML007C-A_NCIM3186 rna-NM_001184487.1_NCIM3186 cds-NP_076904.1_NCIM3186 100.0 100.0 Mismatch 1 1 1 True True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005275.1:235910-236020:- gene-YML007C-A_NCYC1407 rna-NM_001184487.1_NCYC1407 cds-NP_076904.1_NCYC1407 100.0 100.0 Mismatch 1 1 1 True True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994152.1:241846-241956:- gene-YML007C-A_PE2H3 rna-NM_001184487.1_PE2H3 cds-NP_076904.1_PE2H3 100.0 100.0 Mismatch 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999884.1:247941-248051:- gene-YML007C-A_PE2H4 rna-NM_001184487.1_PE2H4 cds-NP_076904.1_PE2H4 100.0 100.0 Mismatch 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001145.3:253162-253272:- gene-YML007C-A_S288C rna-NM_001184487.1_S288C cds-NP_076904.1_S288C 100.0 100.0 Mismatch 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000005.1:285004-285114:+ gene-YML007C-A_SA1 rna-NM_001184487.1_SA1 cds-NP_076904.1_SA1 100.0 100.0 Mismatch 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005499.1:235757-235867:- gene-YML007C-A_ThermosaccDry rna-NM_001184487.1_ThermosaccDry cds-NP_076904.1_ThermosaccDry 100.0 100.0 Mismatch 1 1 1 True True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005467.1:239733-239843:- gene-YML007C-A_VR1 rna-NM_001184487.1_VR1 cds-NP_076904.1_VR1 100.0 100.0 Mismatch 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000027.1:214816-214926:- gene-YML007C-A_ZTW1 rna-NM_001184487.1_ZTW1 cds-NP_076904.1_ZTW1 100.0 100.0 Mismatch 1 1 1 True True False False False

Additional files