MIL1 (YFL034W)


Gene profile

Gene name: MIL1
Reference locus (S288C): YFL034W
Gene biotype: protein_coding

Description: Uncharacterized membrane protein YFL034W; Predicted lipase; binds variant medium clathrin chain Apm2p and contributes to its membrane recruitment; putative integral membrane protein that interacts with Rpp0p component of ribosomal stalk

Top 10 interactors (score): YDR018C (0.814); ENV10 (0.749); GUP2 (0.7); APS1 (0.658); UTP23 (0.615); YOR365C (0.614); APL2 (0.604); DML1 (0.586); MYO1 (0.582); CAT2 (0.558); TRL1 (0.541); YAP1801 (0.53); CHS6 (0.524); CIR2 (0.493); KEI1 (0.482); BUD3 (0.481); APM2 (0.481); FLC3 (0.45); PRM8 (0.45); SNA2 (0.45)

Homologues (species, bitscore): TMCO4 (Homo sapiens, 237.3); Tmco4 (Mus musculus, 236.5); tmco4 (Danio rerio, 240.4); TMCO4 (Xenopus tropicalis, 213.4); F35D11.3 (Caenorhabditis elegans, 227.6); AT4G36210 (Arabidopsis thaliana, 189.5)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005300.1:61807-65031:+ gene-YFL034W_AKU4011 rna-NM_001179932.2_AKU4011 cds-NP_116583.2_AKU4011 99.1 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000182.1:4698-7922:- gene-YFL034W_BG1 rna-NM_001179932.2_BG1 cds-NP_116583.2_BG1 99.4 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005508.1:60686-63910:+ gene-YFL034W_Bruggeman rna-NM_001179932.2_Bruggeman cds-NP_116583.2_Bruggeman 99.8 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005524.1:65580-68804:+ gene-YFL034W_CAT1 rna-NM_001179932.2_CAT1 cds-NP_116583.2_CAT1 99.1 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005364.1:62616-65840:+ gene-YFL034W_CBS1585 rna-NM_001179932.2_CBS1585 cds-NP_116583.2_CBS1585 99.1 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005348.1:36122-39343:+ gene-YFL034W_CBS436 rna-NM_001179932.2_CBS436 cds-NP_116583.2_CBS436 99.8 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005332.1:62352-65576:+ gene-YFL034W_CBS6412 rna-NM_001179932.2_CBS6412 cds-NP_116583.2_CBS6412 99.1 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005316.1:64884-68108:+ gene-YFL034W_CBS6413 rna-NM_001179932.2_CBS6413 cds-NP_116583.2_CBS6413 99.1 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001527.1:61807-65028:+ gene-YFL034W_CENPK1137D rna-NM_001179932.2_CENPK1137D cds-NP_116583.2_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005476.1:60934-64158:+ gene-YFL034W_EthanolRed rna-NM_001179932.2_EthanolRed cds-NP_116583.2_EthanolRed 99.0 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005540.1:62357-65581:+ gene-YFL034W_FaliES1 rna-NM_001179932.2_FaliES1 cds-NP_116583.2_FaliES1 99.0 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000448.1:70815-74036:+ gene-YFL034W_JAY291 rna-NM_001179932.2_JAY291 cds-NP_116583.2_JAY291 99.9 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005412.1:62785-66006:+ gene-YFL034W_MUCL30387 rna-NM_001179932.2_MUCL30387 cds-NP_116583.2_MUCL30387 99.8 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005444.1:60679-63900:+ gene-YFL034W_MUCL30388 rna-NM_001179932.2_MUCL30388 cds-NP_116583.2_MUCL30388 99.9 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005284.1:61001-64225:+ gene-YFL034W_MUCL39482 rna-NM_001179932.2_MUCL39482 cds-NP_116583.2_MUCL39482 99.1 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005428.1:58701-61922:+ gene-YFL034W_MUCL42920 rna-NM_001179932.2_MUCL42920 cds-NP_116583.2_MUCL42920 99.9 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011815.1:65476-68697:+ gene-YFL034W_NCIM3186 rna-NM_001179932.2_NCIM3186 cds-NP_116583.2_NCIM3186 99.1 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005268.1:62074-65298:+ gene-YFL034W_NCYC1407 rna-NM_001179932.2_NCYC1407 cds-NP_116583.2_NCYC1407 99.1 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994145.1:81970-85191:+ gene-YFL034W_PE2H3 rna-NM_001179932.2_PE2H3 cds-NP_116583.2_PE2H3 99.4 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999877.1:81521-84742:+ gene-YFL034W_PE2H4 rna-NM_001179932.2_PE2H4 cds-NP_116583.2_PE2H4 99.4 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001138.5:65477-68698:+ gene-YFL034W_S288C rna-NM_001179932.2_S288C cds-NP_116583.2_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000004.1:266934-270155:- gene-YFL034W_SA1 rna-NM_001179932.2_SA1 cds-NP_116583.2_SA1 99.9 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005492.1:61550-64774:+ gene-YFL034W_ThermosaccDry rna-NM_001179932.2_ThermosaccDry cds-NP_116583.2_ThermosaccDry 99.0 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005460.1:70092-73316:+ gene-YFL034W_VR1 rna-NM_001179932.2_VR1 cds-NP_116583.2_VR1 99.4 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000012.1:46847-50074:+ gene-YFL034W_ZTW1 rna-NM_001179932.2_ZTW1 cds-NP_116583.2_ZTW1 98.9 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047492.1:85913-89134:+ gene-YFL034W_Sparadoxus rna-NM_001179932.2_Sparadoxus cds-NP_116583.2_Sparadoxus 88.4 99.7 Verified 1 1 1 False True False False False

Additional files