Gene name: MIG1
Reference locus (S288C): YGL035C
Gene biotype: protein_coding
Description: Regulatory protein MIG1; Transcription factor involved in glucose repression; sequence specific DNA binding protein containing two Cys2His2 zinc finger motifs; regulated by the SNF1 kinase and the GLC7 phosphatase; regulates filamentous growth along with Mig2p in response to glucose depletion; activated in stochastic pulses of nuclear localization, shuttling between cytosol and nucleus depending on external glucose levels and its phosphorylation state; Belongs to the creA/MIG C2H2-type zinc-finger protein family
Top 10 interactors (score): SNF1 (0.998); HXK2 (0.998); CYC8 (0.998); TUP1 (0.99); SUC2 (0.954); RGT1 (0.944); CAT8 (0.936); SNF4 (0.902); SNF3 (0.902); RGT2 (0.89); MIG2 (0.866); FBP1 (0.866); GAL83 (0.864); SIP2 (0.844); RIM101 (0.827); GAL80 (0.82); SIP4 (0.813); SAK1 (0.804); GLK1 (0.799); SIP1 (0.797)
Homologues (species, bitscore): EGR1 (Homo sapiens, 77.0); Egr1 (Mus musculus, 84.0); egr1 (Danio rerio, 73.2); egr1 (Xenopus tropicalis, 79.7); Spps (Drosophila melanogaster, 75.5); egrh-2 (Caenorhabditis elegans, 73.6)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:433650-435164:- | gene-YGL035C_AKU4011 | rna-NM_001180900.1_AKU4011 | cds-NP_011480.1_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000060.1:141018-142532:+ | gene-YGL035C_BG1 | rna-NM_001180900.1_BG1 | cds-NP_011480.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:434412-435926:- | gene-YGL035C_Bruggeman | rna-NM_001180900.1_Bruggeman | cds-NP_011480.1_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:432607-434121:- | gene-YGL035C_CAT1 | rna-NM_001180900.1_CAT1 | cds-NP_011480.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:435122-436636:- | gene-YGL035C_CBS1585 | rna-NM_001180900.1_CBS1585 | cds-NP_011480.1_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:429468-430982:- | gene-YGL035C_CBS436 | rna-NM_001180900.1_CBS436 | cds-NP_011480.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:427724-429238:- | gene-YGL035C_CBS6412 | rna-NM_001180900.1_CBS6412 | cds-NP_011480.1_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:431790-433304:- | gene-YGL035C_CBS6413 | rna-NM_001180900.1_CBS6413 | cds-NP_011480.1_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:431388-432902:- | gene-YGL035C_CENPK1137D | rna-NM_001180900.1_CENPK1137D | cds-NP_011480.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:421991-423505:- | gene-YGL035C_EthanolRed | rna-NM_001180900.1_EthanolRed | cds-NP_011480.1_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:425231-426745:- | gene-YGL035C_FaliES1 | rna-NM_001180900.1_FaliES1 | cds-NP_011480.1_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000234.1:4570-6084:+ | gene-YGL035C_JAY291 | rna-NM_001180900.1_JAY291 | cds-NP_011480.1_JAY291 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:431617-433131:- | gene-YGL035C_MUCL30387 | rna-NM_001180900.1_MUCL30387 | cds-NP_011480.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:434415-435929:- | gene-YGL035C_MUCL30388 | rna-NM_001180900.1_MUCL30388 | cds-NP_011480.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:430960-432474:- | gene-YGL035C_MUCL39482 | rna-NM_001180900.1_MUCL39482 | cds-NP_011480.1_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:439266-440780:- | gene-YGL035C_MUCL42920 | rna-NM_001180900.1_MUCL42920 | cds-NP_011480.1_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:431548-433062:- | gene-YGL035C_NCIM3186 | rna-NM_001180900.1_NCIM3186 | cds-NP_011480.1_NCIM3186 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:424970-426484:- | gene-YGL035C_NCYC1407 | rna-NM_001180900.1_NCYC1407 | cds-NP_011480.1_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:427580-429094:- | gene-YGL035C_PE2H3 | rna-NM_001180900.1_PE2H3 | cds-NP_011480.1_PE2H3 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:432630-434144:- | gene-YGL035C_PE2H4 | rna-NM_001180900.1_PE2H4 | cds-NP_011480.1_PE2H4 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:431548-433062:- | gene-YGL035C_S288C | rna-NM_001180900.1_S288C | cds-NP_011480.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000021.1:122538-124052:+ | gene-YGL035C_SA1 | rna-NM_001180900.1_SA1 | cds-NP_011480.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:444597-446111:- | gene-YGL035C_ThermosaccDry | rna-NM_001180900.1_ThermosaccDry | cds-NP_011480.1_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:534621-536135:- | gene-YGL035C_VR1 | rna-NM_001180900.1_VR1 | cds-NP_011480.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000014.1:423192-424706:- | gene-YGL035C_ZTW1 | rna-NM_001180900.1_ZTW1 | cds-NP_011480.1_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:432050-433576:- | gene-YGL035C_Sparadoxus | rna-NM_001180900.1_Sparadoxus | cds-NP_011480.1_Sparadoxus | 88.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |