MIF2 (YKL089W)


Gene profile

Gene name: MIF2
Reference locus (S288C): YKL089W
Gene biotype: protein_coding

Description: Protein required for structural integrity of elongating spindles; localizes to the kinetochore; interacts with histones H2A, H2B, and H4; phosphorylated by Ipl1p; orthologous to human centromere constitutive-associated network (CCAN) subunit CENP-C and fission yeast cnp3

Top 10 interactors (score): CSE4 (0.999); MTW1 (0.997); CHL4 (0.988); CTF19 (0.935); AME1 (0.935); MCM21 (0.925); DSN1 (0.916); HHF1 (0.906); CTF3 (0.905); IML3 (0.902); HHF2 (0.874); HTA2 (0.863); HTA1 (0.857); HTB2 (0.857); MCM16 (0.851); OKP1 (0.84); MCM22 (0.824); CBF2 (0.822); NKP2 (0.805); NKP1 (0.8)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005305.1:259951-261600:+ gene-YKL089W_AKU4011 rna-NM_001179655.1_AKU4011 cds-NP_012834.1_AKU4011 99.6 100.0 Verified 1 1 1 True True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000030.1:237076-238731:+ gene-YKL089W_BG1 rna-NM_001179655.1_BG1 cds-NP_012834.1_BG1 98.7 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005513.1:278124-279773:+ gene-YKL089W_Bruggeman rna-NM_001179655.1_Bruggeman cds-NP_012834.1_Bruggeman 99.4 100.0 Verified 1 1 1 True True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005529.1:272921-274576:+ gene-YKL089W_CAT1 rna-NM_001179655.1_CAT1 cds-NP_012834.1_CAT1 98.8 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005369.1:272193-273842:+ gene-YKL089W_CBS1585 rna-NM_001179655.1_CBS1585 cds-NP_012834.1_CBS1585 99.7 100.0 Verified 1 1 1 True True False False False
CBS436 GCA_001738355.1 Sake Asia CM005353.1:270781-272436:+ gene-YKL089W_CBS436 rna-NM_001179655.1_CBS436 cds-NP_012834.1_CBS436 98.7 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005337.1:256821-258470:+ gene-YKL089W_CBS6412 rna-NM_001179655.1_CBS6412 cds-NP_012834.1_CBS6412 99.4 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005321.1:272649-274298:+ gene-YKL089W_CBS6413 rna-NM_001179655.1_CBS6413 cds-NP_012834.1_CBS6413 99.6 100.0 Verified 1 1 1 True True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001532.1:273033-274682:+ gene-YKL089W_CENPK1137D rna-NM_001179655.1_CENPK1137D cds-NP_012834.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005481.1:270645-272294:+ gene-YKL089W_EthanolRed rna-NM_001179655.1_EthanolRed cds-NP_012834.1_EthanolRed 99.7 100.0 Verified 1 1 1 True True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005545.1:271458-273107:+ gene-YKL089W_FaliES1 rna-NM_001179655.1_FaliES1 cds-NP_012834.1_FaliES1 99.6 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000357.1:93785-95440:+ gene-YKL089W_JAY291 rna-NM_001179655.1_JAY291 cds-NP_012834.1_JAY291 98.7 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005417.1:279923-281572:+ gene-YKL089W_MUCL30387 rna-NM_001179655.1_MUCL30387 cds-NP_012834.1_MUCL30387 99.3 100.0 Verified 1 1 1 True True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005449.1:274319-275968:+ gene-YKL089W_MUCL30388 rna-NM_001179655.1_MUCL30388 cds-NP_012834.1_MUCL30388 99.3 100.0 Verified 1 1 1 True True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005289.1:271978-273627:+ gene-YKL089W_MUCL39482 rna-NM_001179655.1_MUCL39482 cds-NP_012834.1_MUCL39482 99.7 100.0 Verified 1 1 1 True True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005433.1:276607-278262:+ gene-YKL089W_MUCL42920 rna-NM_001179655.1_MUCL42920 cds-NP_012834.1_MUCL42920 98.7 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011820.1:273383-275032:+ gene-YKL089W_NCIM3186 rna-NM_001179655.1_NCIM3186 cds-NP_012834.1_NCIM3186 99.3 100.0 Verified 1 1 1 True True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005273.1:272172-273821:+ gene-YKL089W_NCYC1407 rna-NM_001179655.1_NCYC1407 cds-NP_012834.1_NCYC1407 99.4 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994150.1:279257-280912:+ gene-YKL089W_PE2H3 rna-NM_001179655.1_PE2H3 cds-NP_012834.1_PE2H3 99.0 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999882.1:275544-277199:+ gene-YKL089W_PE2H4 rna-NM_001179655.1_PE2H4 cds-NP_012834.1_PE2H4 99.0 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001143.9:273394-275043:+ gene-YKL089W_S288C rna-NM_001179655.1_S288C cds-NP_012834.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000008.1:189517-191172:+ gene-YKL089W_SA1 rna-NM_001179655.1_SA1 cds-NP_012834.1_SA1 98.7 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005497.1:272163-273812:+ gene-YKL089W_ThermosaccDry rna-NM_001179655.1_ThermosaccDry cds-NP_012834.1_ThermosaccDry 99.6 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005465.1:271518-273173:+ gene-YKL089W_VR1 rna-NM_001179655.1_VR1 cds-NP_012834.1_VR1 98.8 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000022.1:270725-272379:+ gene-YKL089W_ZTW1 rna-NM_001179655.1_ZTW1 cds-NP_012834.1_ZTW1 99.0 99.9 Unannotated 1 1 0 False False False True False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047497.1:287731-289380:+ gene-YKL089W_Sparadoxus rna-NM_001179655.1_Sparadoxus cds-NP_012834.1_Sparadoxus 89.1 100.0 Verified 1 1 1 False True False False False

Additional files