Gene name: MID2
Reference locus (S288C): YLR332W
Gene biotype: protein_coding
Description: Cell wall integrity sensor MID2; O-glycosylated plasma membrane protein; acts as a sensor for cell wall integrity signaling and activates the pathway; interacts with Rom2p, a guanine nucleotide exchange factor for Rho1p, and with cell integrity pathway protein Zeo1p; MID2 has a paralog, MTL1, that arose from the whole genome duplication
Top 10 interactors (score): ROM2 (0.995); SLG1 (0.992); WSC2 (0.968); RHO1 (0.964); ROM1 (0.964); SLT2 (0.955); WSC3 (0.943); MTL1 (0.939); PKC1 (0.938); RGD1 (0.921); FKS1 (0.897); BCK1 (0.897); MKK1 (0.887); RLM1 (0.864); SMI1 (0.821); OST6 (0.789); GAS1 (0.788); RHO2 (0.782); MKK2 (0.766); CCW12 (0.746)
Homologues (species, bitscore): clec-223 (Caenorhabditis elegans, 60.8); PERK1 (Arabidopsis thaliana, 52.4)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:739601-740731:+ | gene-YLR332W_AKU4011 | rna-NM_001182221.1_AKU4011 | cds-NP_013436.1_AKU4011 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000080.1:6765-7895:+ | gene-YLR332W_BG1 | rna-NM_001182221.1_BG1 | cds-NP_013436.1_BG1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005514.1:775953-777083:+ | gene-YLR332W_Bruggeman | rna-NM_001182221.1_Bruggeman | cds-NP_013436.1_Bruggeman | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:773506-774636:+ | gene-YLR332W_CAT1 | rna-NM_001182221.1_CAT1 | cds-NP_013436.1_CAT1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005370.1:774518-775648:+ | gene-YLR332W_CBS1585 | rna-NM_001182221.1_CBS1585 | cds-NP_013436.1_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005354.1:758563-759693:+ | gene-YLR332W_CBS436 | rna-NM_001182221.1_CBS436 | cds-NP_013436.1_CBS436 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:811929-813059:+ | gene-YLR332W_CBS6412 | rna-NM_001182221.1_CBS6412 | cds-NP_013436.1_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:775189-776319:+ | gene-YLR332W_CBS6413 | rna-NM_001182221.1_CBS6413 | cds-NP_013436.1_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001533.1:775295-776425:+ | gene-YLR332W_CENPK1137D | rna-NM_001182221.1_CENPK1137D | cds-NP_013436.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005482.1:732419-733549:+ | gene-YLR332W_EthanolRed | rna-NM_001182221.1_EthanolRed | cds-NP_013436.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005546.1:761620-762750:+ | gene-YLR332W_FaliES1 | rna-NM_001182221.1_FaliES1 | cds-NP_013436.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000296.1:5198-6328:- | gene-YLR332W_JAY291 | rna-NM_001182221.1_JAY291 | cds-NP_013436.1_JAY291 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005418.1:774173-775303:+ | gene-YLR332W_MUCL30387 | rna-NM_001182221.1_MUCL30387 | cds-NP_013436.1_MUCL30387 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005450.1:779756-780886:+ | gene-YLR332W_MUCL30388 | rna-NM_001182221.1_MUCL30388 | cds-NP_013436.1_MUCL30388 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:775758-776888:+ | gene-YLR332W_MUCL39482 | rna-NM_001182221.1_MUCL39482 | cds-NP_013436.1_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005434.1:770920-772050:+ | gene-YLR332W_MUCL42920 | rna-NM_001182221.1_MUCL42920 | cds-NP_013436.1_MUCL42920 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:790650-791780:+ | gene-YLR332W_NCIM3186 | rna-NM_001182221.1_NCIM3186 | cds-NP_013436.1_NCIM3186 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:785099-786229:+ | gene-YLR332W_NCYC1407 | rna-NM_001182221.1_NCYC1407 | cds-NP_013436.1_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:772326-773456:+ | gene-YLR332W_PE2H3 | rna-NM_001182221.1_PE2H3 | cds-NP_013436.1_PE2H3 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:772070-773200:+ | gene-YLR332W_PE2H4 | rna-NM_001182221.1_PE2H4 | cds-NP_013436.1_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:790676-791806:+ | gene-YLR332W_S288C | rna-NM_001182221.1_S288C | cds-NP_013436.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000007.1:257163-258293:- | gene-YLR332W_SA1 | rna-NM_001182221.1_SA1 | cds-NP_013436.1_SA1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005498.1:763511-764641:+ | gene-YLR332W_ThermosaccDry | rna-NM_001182221.1_ThermosaccDry | cds-NP_013436.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005466.1:775585-776715:+ | gene-YLR332W_VR1 | rna-NM_001182221.1_VR1 | cds-NP_013436.1_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000025.1:101901-103031:+ | gene-YLR332W_ZTW1 | rna-NM_001182221.1_ZTW1 | cds-NP_013436.1_ZTW1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047498.1:749980-751131:+ | gene-YLR332W_Sparadoxus | rna-NM_001182221.1_Sparadoxus | cds-NP_013436.1_Sparadoxus | 85.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |