MIC10 (YCL057C-A)


Gene profile

Gene name: MIC10
Reference locus (S288C): YCL057C-A
Gene biotype: protein_coding

Description: Conserved component of the MICOS complex; MICOS (formerly MINOS or MitOS) is a mitochondrial inner membrane complex that extends into the intermembrane space and has a role in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane; forms a subcomplex with Mic12p and Mic27p whose assembly and stability requires cardiolipin; homo-oligomers cause membrane bending; ortholog of human MINOS1

Top 10 interactors (score): MIC60 (0.999); MIC19 (0.998); SAM50 (0.998); MIC12 (0.998); MIC26 (0.998); MIC27 (0.998); TOM40 (0.941); SAM37 (0.886); TIM11 (0.884); TOM70 (0.884); ETR1 (0.874); MIA40 (0.847); TOM22 (0.814); UGO1 (0.779); RCF2 (0.779); TOM5 (0.737); AIM24 (0.73); TOM20 (0.712); CMG1 (0.712); RCF1 (0.709)

Homologues (species, bitscore): MINOS1 (Homo sapiens, 52.4); Minos1 (Mus musculus, 50.8); minos1 (Danio rerio, 56.6)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005297.1:25325-25618:- gene-YCL057C-A_AKU4011 rna-NM_001184448.1_AKU4011 cds-NP_065435.1_AKU4011 99.3 100.0 Verified 1 1 1 True True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000090.1:10240-10533:- gene-YCL057C-A_BG1 rna-NM_001184448.1_BG1 cds-NP_065435.1_BG1 100.0 100.0 Verified 1 1 1 True True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005505.1:12740-13033:- gene-YCL057C-A_Bruggeman rna-NM_001184448.1_Bruggeman cds-NP_065435.1_Bruggeman 100.0 100.0 Verified 1 1 1 True True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005521.1:25210-25503:- gene-YCL057C-A_CAT1 rna-NM_001184448.1_CAT1 cds-NP_065435.1_CAT1 99.6 100.0 Verified 1 1 1 True True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005361.1:26010-26303:- gene-YCL057C-A_CBS1585 rna-NM_001184448.1_CBS1585 cds-NP_065435.1_CBS1585 99.3 100.0 Verified 1 1 1 True True False False False
CBS436 GCA_001738355.1 Sake Asia CM005345.1:24556-24849:- gene-YCL057C-A_CBS436 rna-NM_001184448.1_CBS436 cds-NP_065435.1_CBS436 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005329.1:13769-14062:- gene-YCL057C-A_CBS6412 rna-NM_001184448.1_CBS6412 cds-NP_065435.1_CBS6412 99.3 100.0 Mismatch 1 1 1 True True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005313.1:24782-25075:- gene-YCL057C-A_CBS6413 rna-NM_001184448.1_CBS6413 cds-NP_065435.1_CBS6413 99.3 100.0 Verified 1 1 1 True True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001524.1:23626-23919:- gene-YCL057C-A_CENPK1137D rna-NM_001184448.1_CENPK1137D cds-NP_065435.1_CENPK1137D 99.3 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005473.1:23558-23851:- gene-YCL057C-A_EthanolRed rna-NM_001184448.1_EthanolRed cds-NP_065435.1_EthanolRed 99.3 100.0 Verified 1 1 1 True True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005537.1:24320-24613:- gene-YCL057C-A_FaliES1 rna-NM_001184448.1_FaliES1 cds-NP_065435.1_FaliES1 99.3 100.0 Verified 1 1 1 True True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000225.1:59721-60014:+ gene-YCL057C-A_JAY291 rna-NM_001184448.1_JAY291 cds-NP_065435.1_JAY291 99.3 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005409.1:11745-12038:- gene-YCL057C-A_MUCL30387 rna-NM_001184448.1_MUCL30387 cds-NP_065435.1_MUCL30387 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005441.1:12037-12330:- gene-YCL057C-A_MUCL30388 rna-NM_001184448.1_MUCL30388 cds-NP_065435.1_MUCL30388 99.3 100.0 Verified 1 1 1 True True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005281.1:26394-26687:- gene-YCL057C-A_MUCL39482 rna-NM_001184448.1_MUCL39482 cds-NP_065435.1_MUCL39482 98.9 100.0 Verified 1 1 1 True True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005425.1:12317-12610:- gene-YCL057C-A_MUCL42920 rna-NM_001184448.1_MUCL42920 cds-NP_065435.1_MUCL42920 100.0 100.0 Verified 1 1 1 True True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011812.1:23664-23957:- gene-YCL057C-A_NCIM3186 rna-NM_001184448.1_NCIM3186 cds-NP_065435.1_NCIM3186 99.3 100.0 Verified 1 1 1 True True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005265.1:26722-27015:- gene-YCL057C-A_NCYC1407 rna-NM_001184448.1_NCYC1407 cds-NP_065435.1_NCYC1407 99.3 100.0 Verified 1 1 1 True True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994142.1:24492-24785:- gene-YCL057C-A_PE2H3 rna-NM_001184448.1_PE2H3 cds-NP_065435.1_PE2H3 99.3 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999874.1:24449-24742:- gene-YCL057C-A_PE2H4 rna-NM_001184448.1_PE2H4 cds-NP_065435.1_PE2H4 99.3 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001135.5:24032-24325:- gene-YCL057C-A_S288C rna-NM_001184448.1_S288C cds-NP_065435.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000061.1:11184-11477:- gene-YCL057C-A_SA1 rna-NM_001184448.1_SA1 cds-NP_065435.1_SA1 100.0 100.0 Verified 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005489.1:24639-24932:- gene-YCL057C-A_ThermosaccDry rna-NM_001184448.1_ThermosaccDry cds-NP_065435.1_ThermosaccDry 99.3 100.0 Verified 1 1 1 True True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005457.1:29927-30220:- gene-YCL057C-A_VR1 rna-NM_001184448.1_VR1 cds-NP_065435.1_VR1 100.0 100.0 Verified 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000004.1:24865-25158:- gene-YCL057C-A_ZTW1 rna-NM_001184448.1_ZTW1 cds-NP_065435.1_ZTW1 99.6 100.0 Verified 1 1 1 True True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047489.1:54558-54851:- gene-YCL057C-A_Sparadoxus rna-NM_001184448.1_Sparadoxus cds-NP_065435.1_Sparadoxus 93.8 100.0 Verified 1 1 1 False True False False False

Additional files