MHO1 (YJR008W)


Gene profile

Gene name: MHO1
Reference locus (S288C): YJR008W
Gene biotype: protein_coding

Description: MEMO1 family protein YJR008W; Protein of unknown function; inhibits haploid invasive growth when overexpressed; synthetically lethal with phospholipase C (PLC1); expression induced by mild heat-stress on a non-fermentable carbon source, upon entry into stationary phase and upon nitrogen deprivation; repressed by inosine and choline in an Opi1p-dependent manner; highly conserved from bacteria to human; Memo, the human homolog, is an ErbB2 interacting protein with an essential function in cell motility

Top 10 interactors (score): OM45 (0.895); GLC3 (0.895); SYM1 (0.738); GPX1 (0.735); STF2 (0.734); UIP4 (0.73); DCS2 (0.727); IPK1 (0.712); NHX1 (0.702); RPL32 (0.684); INO4 (0.674); INO2 (0.67); YKL091C (0.656); VIP1 (0.651); YJR096W (0.63); TFS1 (0.624); YLR345W (0.619); MSC1 (0.614); IGD1 (0.583); KCS1 (0.572)

Homologues (species, bitscore): MEMO1 (Homo sapiens, 196.1); Memo1 (Mus musculus, 197.6); memo1 (Danio rerio, 197.2); memo1 (Xenopus tropicalis, 176.0); CG8031 (Drosophila melanogaster, 210.7); tag-253 (Caenorhabditis elegans, 194.9); AT2G25280 (Arabidopsis thaliana, 193.4)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005304.1:435601-436617:+ gene-YJR008W_AKU4011 rna-NM_001181665.1_AKU4011 cds-NP_012541.1_AKU4011 99.4 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000190.1:176110-177126:- gene-YJR008W_BG1 rna-NM_001181665.1_BG1 cds-NP_012541.1_BG1 99.5 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005512.1:449698-450714:+ gene-YJR008W_Bruggeman rna-NM_001181665.1_Bruggeman cds-NP_012541.1_Bruggeman 99.6 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005528.1:453639-454655:+ gene-YJR008W_CAT1 rna-NM_001181665.1_CAT1 cds-NP_012541.1_CAT1 99.5 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005368.1:447188-448204:+ gene-YJR008W_CBS1585 rna-NM_001181665.1_CBS1585 cds-NP_012541.1_CBS1585 99.4 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005352.1:466169-467185:+ gene-YJR008W_CBS436 rna-NM_001181665.1_CBS436 cds-NP_012541.1_CBS436 99.5 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005336.1:435415-436431:+ gene-YJR008W_CBS6412 rna-NM_001181665.1_CBS6412 cds-NP_012541.1_CBS6412 99.4 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005320.1:437644-438660:+ gene-YJR008W_CBS6413 rna-NM_001181665.1_CBS6413 cds-NP_012541.1_CBS6413 99.4 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001531.1:434855-435871:+ gene-YJR008W_CENPK1137D rna-NM_001181665.1_CENPK1137D cds-NP_012541.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005480.1:440577-441593:+ gene-YJR008W_EthanolRed rna-NM_001181665.1_EthanolRed cds-NP_012541.1_EthanolRed 99.4 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005544.1:451718-452734:+ gene-YJR008W_FaliES1 rna-NM_001181665.1_FaliES1 cds-NP_012541.1_FaliES1 99.4 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000321.1:512-1528:- gene-YJR008W_JAY291 rna-NM_001181665.1_JAY291 cds-NP_012541.1_JAY291 99.5 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005416.1:450025-451041:+ gene-YJR008W_MUCL30387 rna-NM_001181665.1_MUCL30387 cds-NP_012541.1_MUCL30387 99.3 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005448.1:446547-447563:+ gene-YJR008W_MUCL30388 rna-NM_001181665.1_MUCL30388 cds-NP_012541.1_MUCL30388 99.5 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005288.1:440522-441538:+ gene-YJR008W_MUCL39482 rna-NM_001181665.1_MUCL39482 cds-NP_012541.1_MUCL39482 99.4 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005432.1:445960-446976:+ gene-YJR008W_MUCL42920 rna-NM_001181665.1_MUCL42920 cds-NP_012541.1_MUCL42920 99.5 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011819.1:452409-453425:+ gene-YJR008W_NCIM3186 rna-NM_001181665.1_NCIM3186 cds-NP_012541.1_NCIM3186 99.2 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005272.1:438414-439430:+ gene-YJR008W_NCYC1407 rna-NM_001181665.1_NCYC1407 cds-NP_012541.1_NCYC1407 99.4 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994149.1:456823-457839:+ gene-YJR008W_PE2H3 rna-NM_001181665.1_PE2H3 cds-NP_012541.1_PE2H3 99.5 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999881.1:450517-451533:+ gene-YJR008W_PE2H4 rna-NM_001181665.1_PE2H4 cds-NP_012541.1_PE2H4 99.5 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001142.9:452430-453446:+ gene-YJR008W_S288C rna-NM_001181665.1_S288C cds-NP_012541.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000003.1:248441-249457:+ gene-YJR008W_SA1 rna-NM_001181665.1_SA1 cds-NP_012541.1_SA1 99.5 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005496.1:445377-446393:+ gene-YJR008W_ThermosaccDry rna-NM_001181665.1_ThermosaccDry cds-NP_012541.1_ThermosaccDry 99.4 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005464.1:447742-448758:+ gene-YJR008W_VR1 rna-NM_001181665.1_VR1 cds-NP_012541.1_VR1 99.5 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000021.1:425378-426394:+ gene-YJR008W_ZTW1 rna-NM_001181665.1_ZTW1 cds-NP_012541.1_ZTW1 99.5 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047496.1:450248-451267:+ gene-YJR008W_Sparadoxus rna-NM_001181665.1_Sparadoxus cds-NP_012541.1_Sparadoxus 92.0 100.0 Verified 1 1 1 False True False False False

Additional files