MGM101 (YJR144W)


Gene profile

Gene name: MGM101
Reference locus (S288C): YJR144W
Gene biotype: protein_coding

Description: Mitochondrial genome maintenance protein MGM101; Protein with a role in mitochondrial DNA recombinational repair; also involved in interstrand cross-link repair; binds to and catalyzes the annealing of single-stranded mtDNA; oligomerizes to form rings and filaments; related to Rad52-type recombination proteins, with limited overall similarity but sharing conserved functionally important residues; component of the mitochondrial nucleoid, required for the repair of oxidative mtDNA damage and mitochondrial genome maintenance

Top 10 interactors (score): RPO41 (0.883); MSH1 (0.865); MHR1 (0.845); MSH6 (0.827); ABF2 (0.813); MDM10 (0.794); MMM1 (0.783); MRPL31 (0.762); CCE1 (0.761); MIP1 (0.758); PIF1 (0.755); RAD52 (0.752); FOL1 (0.752); HMI1 (0.732); RIB3 (0.699); CCM1 (0.692); MPH1 (0.688); TRL1 (0.684); MRPS18 (0.675); NAM9 (0.671)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005304.1:672379-673188:+ gene-YJR144W_AKU4011 rna-NM_001181802.1_AKU4011 cds-NP_012678.1_AKU4011 99.6 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000076.1:413-1222:- gene-YJR144W_BG1 rna-NM_001181802.1_BG1 cds-NP_012678.1_BG1 99.0 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005512.1:688112-688921:+ gene-YJR144W_Bruggeman rna-NM_001181802.1_Bruggeman cds-NP_012678.1_Bruggeman 99.6 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005528.1:692747-693556:+ gene-YJR144W_CAT1 rna-NM_001181802.1_CAT1 cds-NP_012678.1_CAT1 99.0 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005368.1:684423-685232:+ gene-YJR144W_CBS1585 rna-NM_001181802.1_CBS1585 cds-NP_012678.1_CBS1585 99.5 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005352.1:703293-704102:+ gene-YJR144W_CBS436 rna-NM_001181802.1_CBS436 cds-NP_012678.1_CBS436 99.7 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005336.1:671198-672007:+ gene-YJR144W_CBS6412 rna-NM_001181802.1_CBS6412 cds-NP_012678.1_CBS6412 99.5 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005320.1:673857-674666:+ gene-YJR144W_CBS6413 rna-NM_001181802.1_CBS6413 cds-NP_012678.1_CBS6413 99.5 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001531.1:683241-684050:+ gene-YJR144W_CENPK1137D rna-NM_001181802.1_CENPK1137D cds-NP_012678.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005480.1:676800-677609:+ gene-YJR144W_EthanolRed rna-NM_001181802.1_EthanolRed cds-NP_012678.1_EthanolRed 99.3 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005544.1:688263-689072:+ gene-YJR144W_FaliES1 rna-NM_001181802.1_FaliES1 cds-NP_012678.1_FaliES1 99.3 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000054.1:85-894:- gene-YJR144W_JAY291 rna-NM_001181802.1_JAY291 cds-NP_012678.1_JAY291 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005416.1:687138-687947:+ gene-YJR144W_MUCL30387 rna-NM_001181802.1_MUCL30387 cds-NP_012678.1_MUCL30387 99.7 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005448.1:684625-685434:+ gene-YJR144W_MUCL30388 rna-NM_001181802.1_MUCL30388 cds-NP_012678.1_MUCL30388 99.6 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005288.1:677908-678717:+ gene-YJR144W_MUCL39482 rna-NM_001181802.1_MUCL39482 cds-NP_012678.1_MUCL39482 99.5 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005432.1:682643-683452:+ gene-YJR144W_MUCL42920 rna-NM_001181802.1_MUCL42920 cds-NP_012678.1_MUCL42920 99.8 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011819.1:700861-701670:+ gene-YJR144W_NCIM3186 rna-NM_001181802.1_NCIM3186 cds-NP_012678.1_NCIM3186 99.6 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005272.1:675455-676264:+ gene-YJR144W_NCYC1407 rna-NM_001181802.1_NCYC1407 cds-NP_012678.1_NCYC1407 99.5 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994149.1:693646-694455:+ gene-YJR144W_PE2H3 rna-NM_001181802.1_PE2H3 cds-NP_012678.1_PE2H3 100.0 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999881.1:687335-688144:+ gene-YJR144W_PE2H4 rna-NM_001181802.1_PE2H4 cds-NP_012678.1_PE2H4 100.0 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001142.9:700882-701691:+ gene-YJR144W_S288C rna-NM_001181802.1_S288C cds-NP_012678.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000069.1:438-1247:- gene-YJR144W_SA1 rna-NM_001181802.1_SA1 cds-NP_012678.1_SA1 99.7 100.0 Verified 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005496.1:682194-683003:+ gene-YJR144W_ThermosaccDry rna-NM_001181802.1_ThermosaccDry cds-NP_012678.1_ThermosaccDry 99.3 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005464.1:684566-685375:+ gene-YJR144W_VR1 rna-NM_001181802.1_VR1 cds-NP_012678.1_VR1 99.7 100.0 Verified 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000021.1:661542-662351:+ gene-YJR144W_ZTW1 rna-NM_001181802.1_ZTW1 cds-NP_012678.1_ZTW1 99.5 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047496.1:695841-696650:+ gene-YJR144W_Sparadoxus rna-NM_001181802.1_Sparadoxus cds-NP_012678.1_Sparadoxus 90.3 100.0 Verified 1 1 1 False True False False False

Additional files