MGA1 (YGR249W)


Gene profile

Gene name: MGA1
Reference locus (S288C): YGR249W
Gene biotype: protein_coding

Description: Protein mga1; Protein similar to heat shock transcription factor; multicopy suppressor of pseudohyphal growth defects of ammonium permease mutants

Top 10 interactors (score): SSA4 (0.926); SSA2 (0.926); SSA1 (0.926); SSA3 (0.926); KSS1 (0.917); FUS3 (0.917); RIM11 (0.912); TOR2 (0.903); TEF1 (0.902); HBS1 (0.901); SKI7 (0.901); LST8 (0.9); KOG1 (0.9); HSP82 (0.786); HSC82 (0.785); RIE1 (0.755); YPL257W (0.75); COS9 (0.744); GAT1 (0.714); SRY1 (0.712)

Homologues (species, bitscore): HSF1 (Homo sapiens, 71.6); Hsf1 (Mus musculus, 71.6); hsf1 (Danio rerio, 68.9); hsf1 (Xenopus tropicalis, 70.9); Hsf (Drosophila melanogaster, 72.4); hsf-1 (Caenorhabditis elegans, 59.3); HSF1 (Arabidopsis thaliana, 64.3)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005301.1:953476-954846:+ gene-YGR249W_AKU4011 rna-NM_001181378.1_AKU4011 cds-NP_011765.1_AKU4011 98.4 100.0 Unannotated 1 1 0 False False False False True
BG1 GCA_001932575.1 Bioethanol South America MSHP01000021.1:233649-235019:+ gene-YGR249W_BG1 rna-NM_001181378.1_BG1 cds-NP_011765.1_BG1 99.4 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005509.1:961094-962461:+ gene-YGR249W_Bruggeman rna-NM_001181378.1_Bruggeman cds-NP_011765.1_Bruggeman 98.0 99.7 Unannotated 1 1 0 False False False False True
CAT1 GCA_001738705.1 Bioethanol South America CM005525.1:960686-962302:+ gene-YGR249W_CAT1 rna-NM_001181378.1_CAT1 cds-NP_011765.1_CAT1 83.0 99.7 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005365.1:956347-957717:+ gene-YGR249W_CBS1585 rna-NM_001181378.1_CBS1585 cds-NP_011765.1_CBS1585 98.4 100.0 Unannotated 1 1 0 False False False False True
CBS436 GCA_001738355.1 Sake Asia CM005349.1:959979-961349:+ gene-YGR249W_CBS436 rna-NM_001181378.1_CBS436 cds-NP_011765.1_CBS436 99.3 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005333.1:947239-948606:+ gene-YGR249W_CBS6412 rna-NM_001181378.1_CBS6412 cds-NP_011765.1_CBS6412 98.2 99.7 Unannotated 1 1 0 False False False False True
CBS6413 GCA_001738265.1 Sake Asia CM005317.1:953291-954661:+ gene-YGR249W_CBS6413 rna-NM_001181378.1_CBS6413 cds-NP_011765.1_CBS6413 98.4 100.0 Unannotated 1 1 0 False False False False True
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001528.1:987731-989101:+ gene-YGR249W_CENPK1137D rna-NM_001181378.1_CENPK1137D cds-NP_011765.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005477.1:941333-942700:+ gene-YGR249W_EthanolRed rna-NM_001181378.1_EthanolRed cds-NP_011765.1_EthanolRed 98.1 99.7 Unannotated 1 1 0 False False False False True
FaliES1 GCA_001738715.1 Bioethanol Asia CM005541.1:946139-947506:+ gene-YGR249W_FaliES1 rna-NM_001181378.1_FaliES1 cds-NP_011765.1_FaliES1 98.1 99.7 Unannotated 1 1 0 False False False False True
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000076.1:82807-84176:- gene-YGR249W_JAY291 rna-NM_001181378.1_JAY291 cds-NP_011765.1_JAY291 99.1 99.9 Unannotated 1 1 0 False False False True False
MUCL30387 GCA_001738515.1 Bread Europe CM005413.1:959009-960376:+ gene-YGR249W_MUCL30387 rna-NM_001181378.1_MUCL30387 cds-NP_011765.1_MUCL30387 98.0 99.7 Unannotated 1 1 0 False False False False True
MUCL30388 GCA_001738495.1 Bread Europe CM005445.1:958274-959641:+ gene-YGR249W_MUCL30388 rna-NM_001181378.1_MUCL30388 cds-NP_011765.1_MUCL30388 98.0 99.7 Unannotated 1 1 0 False False False False True
MUCL39482 GCA_001738235.1 Sake Asia CM005285.1:951455-952822:+ gene-YGR249W_MUCL39482 rna-NM_001181378.1_MUCL39482 cds-NP_011765.1_MUCL39482 98.2 99.7 Unannotated 1 1 0 False False False False True
MUCL42920 GCA_001738485.1 Bread Europe CM005429.1:969986-971353:+ gene-YGR249W_MUCL42920 rna-NM_001181378.1_MUCL42920 cds-NP_011765.1_MUCL42920 98.0 99.7 Unannotated 1 1 0 False False False False True
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011816.1:988049-989419:+ gene-YGR249W_NCIM3186 rna-NM_001181378.1_NCIM3186 cds-NP_011765.1_NCIM3186 98.1 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005269.1:947086-948453:+ gene-YGR249W_NCYC1407 rna-NM_001181378.1_NCYC1407 cds-NP_011765.1_NCYC1407 98.1 99.7 Unannotated 1 1 0 False False False False True
PE2H3 GCA_905220325.1 Bioethanol South America HG994146.1:972272-973642:+ gene-YGR249W_PE2H3 rna-NM_001181378.1_PE2H3 cds-NP_011765.1_PE2H3 99.4 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999878.1:977111-978481:+ gene-YGR249W_PE2H4 rna-NM_001181378.1_PE2H4 cds-NP_011765.1_PE2H4 99.4 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001139.9:988049-989419:+ gene-YGR249W_S288C rna-NM_001181378.1_S288C cds-NP_011765.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000045.1:11995-13362:- gene-YGR249W_SA1 rna-NM_001181378.1_SA1 cds-NP_011765.1_SA1 98.5 99.7 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005493.1:966659-968026:+ gene-YGR249W_ThermosaccDry rna-NM_001181378.1_ThermosaccDry cds-NP_011765.1_ThermosaccDry 98.1 99.7 Unannotated 1 1 0 False False False False True
VR1 GCA_001738595.1 Bioethanol South America CM005461.1:1072437-1073804:+ gene-YGR249W_VR1 rna-NM_001181378.1_VR1 cds-NP_011765.1_VR1 98.1 99.7 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000016.1:268072-269439:+ gene-YGR249W_ZTW1 rna-NM_001181378.1_ZTW1 cds-NP_011765.1_ZTW1 98.1 99.7 Unannotated 1 1 0 False False False False True
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047493.1:958831-960195:+ gene-YGR249W_Sparadoxus rna-NM_001181378.1_Sparadoxus cds-NP_011765.1_Sparadoxus 89.0 99.3 Verified 1 1 1 False True False False False

Additional files