MET8 (YBR213W)


Gene profile

Gene name: MET8
Reference locus (S288C): YBR213W
Gene biotype: protein_coding

Description: Siroheme biosynthesis protein MET8; Bifunctional dehydrogenase and ferrochelatase; involved in the biosynthesis of siroheme, a prosthetic group used by sulfite reductase; required for sulfate assimilation and methionine biosynthesis; Belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family. MET8 subfamily

Top 10 interactors (score): MET1 (0.997); MET16 (0.979); MET10 (0.976); MET14 (0.945); MET5 (0.905); MET17 (0.878); MET22 (0.86); MET3 (0.858); MET28 (0.793); SUL2 (0.767); SAH1 (0.742); MET2 (0.711); ARO7 (0.705); STR3 (0.697); HEM12 (0.695); MET12 (0.619); NCP1 (0.611); CYS3 (0.605); HEM3 (0.601); HEM4 (0.578)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005296.1:634670-635494:+ gene-YBR213W_AKU4011 rna-NM_001178561.1_AKU4011 cds-NP_009772.1_AKU4011 99.6 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000066.1:5591-6415:+ gene-YBR213W_BG1 rna-NM_001178561.1_BG1 cds-NP_009772.1_BG1 99.1 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005504.1:635828-636652:+ gene-YBR213W_Bruggeman rna-NM_001178561.1_Bruggeman cds-NP_009772.1_Bruggeman 99.5 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005520.1:639030-639854:+ gene-YBR213W_CAT1 rna-NM_001178561.1_CAT1 cds-NP_009772.1_CAT1 99.1 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005360.1:626202-627026:+ gene-YBR213W_CBS1585 rna-NM_001178561.1_CBS1585 cds-NP_009772.1_CBS1585 99.6 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005344.1:632629-633453:+ gene-YBR213W_CBS436 rna-NM_001178561.1_CBS436 cds-NP_009772.1_CBS436 99.1 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005328.1:721179-722003:+ gene-YBR213W_CBS6412 rna-NM_001178561.1_CBS6412 cds-NP_009772.1_CBS6412 99.6 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005312.1:632241-633065:+ gene-YBR213W_CBS6413 rna-NM_001178561.1_CBS6413 cds-NP_009772.1_CBS6413 99.6 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001523.1:644114-644938:+ gene-YBR213W_CENPK1137D rna-NM_001178561.1_CENPK1137D cds-NP_009772.1_CENPK1137D 99.3 100.0 Verified 1 1 1 False True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005472.1:757916-758740:+ gene-YBR213W_EthanolRed rna-NM_001178561.1_EthanolRed cds-NP_009772.1_EthanolRed 99.5 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005536.1:651023-651847:+ gene-YBR213W_FaliES1 rna-NM_001178561.1_FaliES1 cds-NP_009772.1_FaliES1 99.5 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000326.1:5395-6219:+ gene-YBR213W_JAY291 rna-NM_001178561.1_JAY291 cds-NP_009772.1_JAY291 99.1 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005408.1:637841-638665:+ gene-YBR213W_MUCL30387 rna-NM_001178561.1_MUCL30387 cds-NP_009772.1_MUCL30387 99.6 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005440.1:654919-655743:+ gene-YBR213W_MUCL30388 rna-NM_001178561.1_MUCL30388 cds-NP_009772.1_MUCL30388 99.0 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005280.1:624554-625378:+ gene-YBR213W_MUCL39482 rna-NM_001178561.1_MUCL39482 cds-NP_009772.1_MUCL39482 99.6 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005424.1:634037-634861:+ gene-YBR213W_MUCL42920 rna-NM_001178561.1_MUCL42920 cds-NP_009772.1_MUCL42920 99.8 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011811.1:650165-650989:+ gene-YBR213W_NCIM3186 rna-NM_001178561.1_NCIM3186 cds-NP_009772.1_NCIM3186 99.8 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005264.1:626416-627240:+ gene-YBR213W_NCYC1407 rna-NM_001178561.1_NCYC1407 cds-NP_009772.1_NCYC1407 99.6 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994141.1:649533-650357:+ gene-YBR213W_PE2H3 rna-NM_001178561.1_PE2H3 cds-NP_009772.1_PE2H3 99.1 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999873.1:647209-648033:+ gene-YBR213W_PE2H4 rna-NM_001178561.1_PE2H4 cds-NP_009772.1_PE2H4 99.1 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001134.8:650368-651192:+ gene-YBR213W_S288C rna-NM_001178561.1_S288C cds-NP_009772.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000019.1:5488-6312:+ gene-YBR213W_SA1 rna-NM_001178561.1_SA1 cds-NP_009772.1_SA1 99.1 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005488.1:650033-650857:+ gene-YBR213W_ThermosaccDry rna-NM_001178561.1_ThermosaccDry cds-NP_009772.1_ThermosaccDry 99.5 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005456.1:630204-631028:+ gene-YBR213W_VR1 rna-NM_001178561.1_VR1 cds-NP_009772.1_VR1 99.1 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000003.1:622899-623723:+ gene-YBR213W_ZTW1 rna-NM_001178561.1_ZTW1 cds-NP_009772.1_ZTW1 99.6 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047488.1:666866-667690:+ gene-YBR213W_Sparadoxus rna-NM_001178561.1_Sparadoxus cds-NP_009772.1_Sparadoxus 90.0 100.0 Verified 1 1 1 False True False False False

Additional files