MET7 (YOR241W)


Gene profile

Gene name: MET7
Reference locus (S288C): YOR241W
Gene biotype: protein_coding

Description: Folylpolyglutamate synthetase; catalyzes extension of the glutamate chains of the folate coenzymes, required for methionine synthesis and for maintenance of mitochondrial DNA; protein abundance increases in response to DNA replication stress

Top 10 interactors (score): DFR1 (0.989); MIS1 (0.986); SHM1 (0.98); ADE3 (0.978); SHM2 (0.97); CDC21 (0.96); FOL1 (0.945); RMA1 (0.899); FOL3 (0.885); MET12 (0.88); MET13 (0.877); FOL2 (0.851); MET6 (0.803); TRP3 (0.781); PRO2 (0.759); RNR1 (0.718); PUS7 (0.713); TRP5 (0.711); FAU1 (0.696); SEC59 (0.688)

Homologues (species, bitscore): FPGS (Homo sapiens, 323.6); Fpgs (Mus musculus, 323.2); fpgs (Danio rerio, 324.7); fpgs (Xenopus tropicalis, 318.2); CG2543 (Drosophila melanogaster, 248.4); F25B5.6 (Caenorhabditis elegans, 272.3); DFB (Arabidopsis thaliana, 268.1)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005309.1:777768-779413:+ gene-YOR241W_AKU4011 rna-NM_001183660.1_AKU4011 cds-NP_014884.1_AKU4011 99.3 99.9 Verified 1 1 0 False False False True False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000123.1:179807-181453:+ gene-YOR241W_BG1 rna-NM_001183660.1_BG1 cds-NP_014884.1_BG1 100.0 100.0 Verified 1 1 1 True True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005517.1:763234-764880:+ gene-YOR241W_Bruggeman rna-NM_001183660.1_Bruggeman cds-NP_014884.1_Bruggeman 100.0 100.0 Verified 1 1 1 True True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005533.1:763884-765531:+ gene-YOR241W_CAT1 rna-NM_001183660.1_CAT1 cds-NP_014884.1_CAT1 99.8 100.0 Unannotated 1 1 0 False False False True False
CBS1585 GCA_001738375.1 Sake Asia CM005373.1:760757-762402:+ gene-YOR241W_CBS1585 rna-NM_001183660.1_CBS1585 cds-NP_014884.1_CBS1585 99.3 99.9 Verified 1 1 0 False False False True False
CBS436 GCA_001738355.1 Sake Asia CM005357.1:759451-761097:+ gene-YOR241W_CBS436 rna-NM_001183660.1_CBS436 cds-NP_014884.1_CBS436 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005341.1:757876-759521:+ gene-YOR241W_CBS6412 rna-NM_001183660.1_CBS6412 cds-NP_014884.1_CBS6412 99.3 99.9 Mismatch 1 1 0 False False False True False
CBS6413 GCA_001738265.1 Sake Asia CM005325.1:766516-768161:+ gene-YOR241W_CBS6413 rna-NM_001183660.1_CBS6413 cds-NP_014884.1_CBS6413 99.3 99.9 Verified 1 1 0 False False False True False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001536.1:786758-788404:+ gene-YOR241W_CENPK1137D rna-NM_001183660.1_CENPK1137D cds-NP_014884.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005485.1:753888-755533:+ gene-YOR241W_EthanolRed rna-NM_001183660.1_EthanolRed cds-NP_014884.1_EthanolRed 99.4 99.9 Verified 1 1 0 False False False True False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005549.1:759287-760932:+ gene-YOR241W_FaliES1 rna-NM_001183660.1_FaliES1 cds-NP_014884.1_FaliES1 99.4 99.9 Verified 1 1 0 False False False True False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000381.1:65905-67552:- gene-YOR241W_JAY291 rna-NM_001183660.1_JAY291 cds-NP_014884.1_JAY291 99.9 100.0 Verified 1 1 0 False False False True False
MUCL30387 GCA_001738515.1 Bread Europe CM005421.1:767505-769151:+ gene-YOR241W_MUCL30387 rna-NM_001183660.1_MUCL30387 cds-NP_014884.1_MUCL30387 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005453.1:774623-776269:+ gene-YOR241W_MUCL30388 rna-NM_001183660.1_MUCL30388 cds-NP_014884.1_MUCL30388 100.0 100.0 Verified 1 1 1 True True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005293.1:768087-769732:+ gene-YOR241W_MUCL39482 rna-NM_001183660.1_MUCL39482 cds-NP_014884.1_MUCL39482 99.3 99.9 Verified 1 1 0 False False False True False
MUCL42920 GCA_001738485.1 Bread Europe CM005437.1:777675-779321:+ gene-YOR241W_MUCL42920 rna-NM_001183660.1_MUCL42920 cds-NP_014884.1_MUCL42920 100.0 100.0 Verified 1 1 1 True True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011824.1:786884-788530:+ gene-YOR241W_NCIM3186 rna-NM_001183660.1_NCIM3186 cds-NP_014884.1_NCIM3186 99.4 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005277.1:768186-769831:+ gene-YOR241W_NCYC1407 rna-NM_001183660.1_NCYC1407 cds-NP_014884.1_NCYC1407 99.3 99.9 Verified 1 1 0 False False False True False
PE2H3 GCA_905220325.1 Bioethanol South America HG994154.1:767487-769133:+ gene-YOR241W_PE2H3 rna-NM_001183660.1_PE2H3 cds-NP_014884.1_PE2H3 100.0 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999886.1:777864-779510:+ gene-YOR241W_PE2H4 rna-NM_001183660.1_PE2H4 cds-NP_014884.1_PE2H4 100.0 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001147.6:786995-788641:+ gene-YOR241W_S288C rna-NM_001183660.1_S288C cds-NP_014884.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000006.1:196988-198634:+ gene-YOR241W_SA1 rna-NM_001183660.1_SA1 cds-NP_014884.1_SA1 99.9 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005501.1:758470-760115:+ gene-YOR241W_ThermosaccDry rna-NM_001183660.1_ThermosaccDry cds-NP_014884.1_ThermosaccDry 99.4 99.9 Verified 1 1 0 False False False True False
VR1 GCA_001738595.1 Bioethanol South America CM005469.1:821927-823573:+ gene-YOR241W_VR1 rna-NM_001183660.1_VR1 cds-NP_014884.1_VR1 100.0 100.0 Verified 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000032.1:491386-493031:+ gene-YOR241W_ZTW1 rna-NM_001183660.1_ZTW1 cds-NP_014884.1_ZTW1 99.5 99.9 Verified 1 1 0 False False False True False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047501.1:764389-766029:+ gene-YOR241W_Sparadoxus rna-NM_001183660.1_Sparadoxus cds-NP_014884.1_Sparadoxus 89.9 99.5 Unannotated 1 1 0 False False True False False

Additional files