Gene name: MER1
Reference locus (S288C): YNL210W
Gene biotype: protein_coding
Description: Meiotic recombination 1 protein; mRNA-binding protein required for meiosis-specific mRNA splicing; required for chromosome pairing and meiotic recombination; Mer1p regulon embraces four essential meiotic pre-mRNAs: REC107, HFM1, AMA1 and SPO22
Top 10 interactors (score): REC107 (0.956); AMA1 (0.949); NAM8 (0.915); HFM1 (0.898); BUD13 (0.869); MUD2 (0.867); SNU56 (0.857); IST3 (0.818); SPO22 (0.815); MEI4 (0.762); REC114 (0.751); PML1 (0.748); REC102 (0.748); PCH2 (0.747); SPO13 (0.713); RED1 (0.711); HOP1 (0.69); UME6 (0.653); IME1 (0.65); MSL5 (0.647)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005308.1:244711-245523:+ | gene-YNL210W_AKU4011 | rna-NM_001183048.1_AKU4011 | cds-NP_014189.1_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000155.1:148657-149469:+ | gene-YNL210W_BG1 | rna-NM_001183048.1_BG1 | cds-NP_014189.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005516.1:254756-255568:+ | gene-YNL210W_Bruggeman | rna-NM_001183048.1_Bruggeman | cds-NP_014189.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005532.1:261910-262722:+ | gene-YNL210W_CAT1 | rna-NM_001183048.1_CAT1 | cds-NP_014189.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005372.1:245106-245918:+ | gene-YNL210W_CBS1585 | rna-NM_001183048.1_CBS1585 | cds-NP_014189.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005356.1:240187-240999:+ | gene-YNL210W_CBS436 | rna-NM_001183048.1_CBS436 | cds-NP_014189.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005340.1:241144-241956:+ | gene-YNL210W_CBS6412 | rna-NM_001183048.1_CBS6412 | cds-NP_014189.1_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005324.1:241790-242602:+ | gene-YNL210W_CBS6413 | rna-NM_001183048.1_CBS6413 | cds-NP_014189.1_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001535.1:244732-245544:+ | gene-YNL210W_CENPK1137D | rna-NM_001183048.1_CENPK1137D | cds-NP_014189.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005484.1:242348-243160:+ | gene-YNL210W_EthanolRed | rna-NM_001183048.1_EthanolRed | cds-NP_014189.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005548.1:237090-237902:+ | gene-YNL210W_FaliES1 | rna-NM_001183048.1_FaliES1 | cds-NP_014189.1_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000082.1:148250-149062:+ | gene-YNL210W_JAY291 | rna-NM_001183048.1_JAY291 | cds-NP_014189.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005420.1:250292-251104:+ | gene-YNL210W_MUCL30387 | rna-NM_001183048.1_MUCL30387 | cds-NP_014189.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005452.1:248873-249685:+ | gene-YNL210W_MUCL30388 | rna-NM_001183048.1_MUCL30388 | cds-NP_014189.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005292.1:242596-243408:+ | gene-YNL210W_MUCL39482 | rna-NM_001183048.1_MUCL39482 | cds-NP_014189.1_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005436.1:244854-245666:+ | gene-YNL210W_MUCL42920 | rna-NM_001183048.1_MUCL42920 | cds-NP_014189.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011823.1:250900-251712:+ | gene-YNL210W_NCIM3186 | rna-NM_001183048.1_NCIM3186 | cds-NP_014189.1_NCIM3186 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005276.1:244686-245498:+ | gene-YNL210W_NCYC1407 | rna-NM_001183048.1_NCYC1407 | cds-NP_014189.1_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994153.1:241595-242407:+ | gene-YNL210W_PE2H3 | rna-NM_001183048.1_PE2H3 | cds-NP_014189.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999885.1:240983-241795:+ | gene-YNL210W_PE2H4 | rna-NM_001183048.1_PE2H4 | cds-NP_014189.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001146.8:250931-251743:+ | gene-YNL210W_S288C | rna-NM_001183048.1_S288C | cds-NP_014189.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000040.1:566-1378:- | gene-YNL210W_SA1 | rna-NM_001183048.1_SA1 | cds-NP_014189.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005500.1:237946-238758:+ | gene-YNL210W_ThermosaccDry | rna-NM_001183048.1_ThermosaccDry | cds-NP_014189.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005468.1:256950-257762:+ | gene-YNL210W_VR1 | rna-NM_001183048.1_VR1 | cds-NP_014189.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000030.1:148277-149089:+ | gene-YNL210W_ZTW1 | rna-NM_001183048.1_ZTW1 | cds-NP_014189.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047500.1:248749-249561:+ | gene-YNL210W_Sparadoxus | rna-NM_001183048.1_Sparadoxus | cds-NP_014189.1_Sparadoxus | 82.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |