MEI5 (YPL121C)


Gene profile

Gene name: MEI5
Reference locus (S288C): YPL121C
Gene biotype: protein_coding

Description: Meiosis-specific protein involved in meiotic recombination; involved in DMC1-dependent meiotic recombination; forms heterodimer with Sae3p; proposed to be an assembly factor for Dmc1p

Top 10 interactors (score): SAE3 (0.99); DMC1 (0.86); PIP2 (0.711); MND1 (0.705); OAF1 (0.693); YKR005C (0.671); YOL131W (0.655); YBR184W (0.617); MPC54 (0.609); BSC4 (0.573); SLZ1 (0.57); HOP1 (0.568); ZIP1 (0.567); GMC2 (0.526); MSH4 (0.526); MRS1 (0.526); SPO11 (0.487); ECM11 (0.483); BUG1 (0.483); CSH1 (0.482)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005310.1:298602-299270:- gene-YPL121C_AKU4011 rna-NM_001183935.1_AKU4011 cds-NP_015204.1_AKU4011 99.8 100.0 Verified 1 1 1 True True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000069.1:504359-505027:- gene-YPL121C_BG1 rna-NM_001183935.1_BG1 cds-NP_015204.1_BG1 100.0 100.0 Verified 1 1 1 True True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005518.1:324607-325275:- gene-YPL121C_Bruggeman rna-NM_001183935.1_Bruggeman cds-NP_015204.1_Bruggeman 99.8 100.0 Verified 1 1 1 True True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005534.1:321274-321942:- gene-YPL121C_CAT1 rna-NM_001183935.1_CAT1 cds-NP_015204.1_CAT1 100.0 100.0 Verified 1 1 1 True True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005374.1:302675-303343:- gene-YPL121C_CBS1585 rna-NM_001183935.1_CBS1585 cds-NP_015204.1_CBS1585 99.8 100.0 Verified 1 1 1 True True False False False
CBS436 GCA_001738355.1 Sake Asia CM005358.1:317350-318018:- gene-YPL121C_CBS436 rna-NM_001183935.1_CBS436 cds-NP_015204.1_CBS436 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005342.1:307344-308012:- gene-YPL121C_CBS6412 rna-NM_001183935.1_CBS6412 cds-NP_015204.1_CBS6412 99.8 100.0 Mismatch 1 1 1 True True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005326.1:299311-299979:- gene-YPL121C_CBS6413 rna-NM_001183935.1_CBS6413 cds-NP_015204.1_CBS6413 99.8 100.0 Verified 1 1 1 True True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001537.1:320895-321563:- gene-YPL121C_CENPK1137D rna-NM_001183935.1_CENPK1137D cds-NP_015204.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005486.1:297292-297960:- gene-YPL121C_EthanolRed rna-NM_001183935.1_EthanolRed cds-NP_015204.1_EthanolRed 99.8 100.0 Verified 1 1 1 True True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005550.1:304884-305552:- gene-YPL121C_FaliES1 rna-NM_001183935.1_FaliES1 cds-NP_015204.1_FaliES1 99.8 100.0 Verified 1 1 1 True True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000007.1:60265-60933:+ gene-YPL121C_JAY291 rna-NM_001183935.1_JAY291 cds-NP_015204.1_JAY291 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005422.1:315846-316514:- gene-YPL121C_MUCL30387 rna-NM_001183935.1_MUCL30387 cds-NP_015204.1_MUCL30387 99.8 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005454.1:313867-314535:- gene-YPL121C_MUCL30388 rna-NM_001183935.1_MUCL30388 cds-NP_015204.1_MUCL30388 100.0 100.0 Verified 1 1 1 True True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005294.1:296004-296672:- gene-YPL121C_MUCL39482 rna-NM_001183935.1_MUCL39482 cds-NP_015204.1_MUCL39482 99.8 100.0 Verified 1 1 1 True True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005438.1:353248-353916:- gene-YPL121C_MUCL42920 rna-NM_001183935.1_MUCL42920 cds-NP_015204.1_MUCL42920 99.8 100.0 Verified 1 1 1 True True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011825.1:320945-321613:- gene-YPL121C_NCIM3186 rna-NM_001183935.1_NCIM3186 cds-NP_015204.1_NCIM3186 99.8 100.0 Verified 1 1 1 True True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005278.1:302457-303125:- gene-YPL121C_NCYC1407 rna-NM_001183935.1_NCYC1407 cds-NP_015204.1_NCYC1407 99.8 100.0 Verified 1 1 1 True True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994155.1:309949-310617:- gene-YPL121C_PE2H3 rna-NM_001183935.1_PE2H3 cds-NP_015204.1_PE2H3 100.0 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999887.1:309572-310240:- gene-YPL121C_PE2H4 rna-NM_001183935.1_PE2H4 cds-NP_015204.1_PE2H4 100.0 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001148.4:320962-321630:- gene-YPL121C_S288C rna-NM_001183935.1_S288C cds-NP_015204.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000012.1:52050-52718:+ gene-YPL121C_SA1 rna-NM_001183935.1_SA1 cds-NP_015204.1_SA1 100.0 100.0 Verified 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005502.1:304682-305350:- gene-YPL121C_ThermosaccDry rna-NM_001183935.1_ThermosaccDry cds-NP_015204.1_ThermosaccDry 99.8 100.0 Verified 1 1 1 True True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005470.1:319661-320329:- gene-YPL121C_VR1 rna-NM_001183935.1_VR1 cds-NP_015204.1_VR1 100.0 100.0 Verified 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000033.1:304007-304675:- gene-YPL121C_ZTW1 rna-NM_001183935.1_ZTW1 cds-NP_015204.1_ZTW1 99.8 100.0 Verified 1 1 1 True True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047502.1:305748-306416:- gene-YPL121C_Sparadoxus rna-NM_001183935.1_Sparadoxus cds-NP_015204.1_Sparadoxus 88.6 100.0 Verified 1 1 1 False True False False False

Additional files