MEH1 (YKR007W)


Gene profile

Gene name: MEH1
Reference locus (S288C): YKR007W
Gene biotype: protein_coding

Description: Protein MEH1; Component of the EGO and GSE complexes; EGO is involved in the regulation of microautophagy and GSE is required for proper sorting of amino acid permease Gap1p; loss results in a defect in vacuolar acidification

Top 10 interactors (score): GTR1 (0.999); GTR2 (0.999); EGO2 (0.999); SLM4 (0.999); ERS1 (0.97); ERD1 (0.964); PIB2 (0.941); VAC8 (0.939); TCO89 (0.847); LTV1 (0.832); VAM6 (0.812); SNA4 (0.8); EGO4 (0.799); AKR1 (0.784); TOR1 (0.776); PFA3 (0.765); KOG1 (0.754); LST4 (0.75); LST7 (0.748); YPL199C (0.748)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005305.1:437438-437986:+ gene-YKR007W_AKU4011 rna-NM_001179797.1_AKU4011 cds-NP_012932.1_AKU4011 98.5 98.9 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000113.1:205923-206471:- gene-YKR007W_BG1 rna-NM_001179797.1_BG1 cds-NP_012932.1_BG1 98.9 98.9 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005513.1:459141-459689:+ gene-YKR007W_Bruggeman rna-NM_001179797.1_Bruggeman cds-NP_012932.1_Bruggeman 98.9 98.9 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005529.1:454246-454794:+ gene-YKR007W_CAT1 rna-NM_001179797.1_CAT1 cds-NP_012932.1_CAT1 98.9 98.9 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005369.1:450178-450726:+ gene-YKR007W_CBS1585 rna-NM_001179797.1_CBS1585 cds-NP_012932.1_CBS1585 98.5 98.9 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005353.1:449015-449563:+ gene-YKR007W_CBS436 rna-NM_001179797.1_CBS436 cds-NP_012932.1_CBS436 98.9 98.9 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005337.1:434336-434884:+ gene-YKR007W_CBS6412 rna-NM_001179797.1_CBS6412 cds-NP_012932.1_CBS6412 98.5 98.9 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005321.1:450010-450558:+ gene-YKR007W_CBS6413 rna-NM_001179797.1_CBS6413 cds-NP_012932.1_CBS6413 98.5 98.9 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001532.1:451111-451659:+ gene-YKR007W_CENPK1137D rna-NM_001179797.1_CENPK1137D cds-NP_012932.1_CENPK1137D 98.9 98.9 Verified 1 1 1 False True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005481.1:447919-448467:+ gene-YKR007W_EthanolRed rna-NM_001179797.1_EthanolRed cds-NP_012932.1_EthanolRed 98.5 98.9 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005545.1:450008-450556:+ gene-YKR007W_FaliES1 rna-NM_001179797.1_FaliES1 cds-NP_012932.1_FaliES1 98.5 98.9 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000120.1:6251-6799:- gene-YKR007W_JAY291 rna-NM_001179797.1_JAY291 cds-NP_012932.1_JAY291 98.9 98.9 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005417.1:458455-459003:+ gene-YKR007W_MUCL30387 rna-NM_001179797.1_MUCL30387 cds-NP_012932.1_MUCL30387 98.9 98.9 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005449.1:454066-454614:+ gene-YKR007W_MUCL30388 rna-NM_001179797.1_MUCL30388 cds-NP_012932.1_MUCL30388 98.9 98.9 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005289.1:449495-450043:+ gene-YKR007W_MUCL39482 rna-NM_001179797.1_MUCL39482 cds-NP_012932.1_MUCL39482 98.5 98.9 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005433.1:455300-455848:+ gene-YKR007W_MUCL42920 rna-NM_001179797.1_MUCL42920 cds-NP_012932.1_MUCL42920 98.9 98.9 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011820.1:451423-451977:+ gene-YKR007W_NCIM3186 rna-NM_001179797.1_NCIM3186 cds-NP_012932.1_NCIM3186 99.2 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005273.1:449703-450251:+ gene-YKR007W_NCYC1407 rna-NM_001179797.1_NCYC1407 cds-NP_012932.1_NCYC1407 98.5 98.9 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994150.1:474353-474901:+ gene-YKR007W_PE2H3 rna-NM_001179797.1_PE2H3 cds-NP_012932.1_PE2H3 98.9 98.9 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999882.1:459095-459643:+ gene-YKR007W_PE2H4 rna-NM_001179797.1_PE2H4 cds-NP_012932.1_PE2H4 98.9 98.9 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001143.9:451434-451988:+ gene-YKR007W_S288C rna-NM_001179797.1_S288C cds-NP_012932.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000027.1:129697-130245:+ gene-YKR007W_SA1 rna-NM_001179797.1_SA1 cds-NP_012932.1_SA1 98.9 98.9 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005497.1:450106-450654:+ gene-YKR007W_ThermosaccDry rna-NM_001179797.1_ThermosaccDry cds-NP_012932.1_ThermosaccDry 98.5 98.9 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005465.1:449376-449924:+ gene-YKR007W_VR1 rna-NM_001179797.1_VR1 cds-NP_012932.1_VR1 98.9 98.9 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000022.1:448144-448692:+ gene-YKR007W_ZTW1 rna-NM_001179797.1_ZTW1 cds-NP_012932.1_ZTW1 98.5 98.9 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047497.1:473086-473634:+ gene-YKR007W_Sparadoxus rna-NM_001179797.1_Sparadoxus cds-NP_012932.1_Sparadoxus 87.5 98.9 Verified 1 1 1 False True False False False

Additional files