Gene name: MEF1
Reference locus (S288C): YLR069C
Gene biotype: protein_coding
Description: Elongation factor g, mitochondrial; Mitochondrial elongation factor involved in translational elongation
Top 10 interactors (score): MRPS5 (0.993); MNP1 (0.984); YML6 (0.971); MRPL7 (0.966); TUF1 (0.963); MRPL4 (0.955); RML2 (0.95); MSY1 (0.941); MRPL11 (0.94); NAM9 (0.933); MRPL16 (0.922); RRF1 (0.913); RTC6 (0.913); IFM1 (0.912); OXA1 (0.911); TOM40 (0.911); MRPL9 (0.901); MIR1 (0.896); PCP1 (0.887); CLU1 (0.885)
Homologues (species, bitscore): GFM1 (Homo sapiens, 811.2); Gfm1 (Mus musculus, 810.8); gfm1 (Danio rerio, 798.1); GFM1 (Xenopus tropicalis, 797.7); ico (Drosophila melanogaster, 776.2); gfm-1 (Caenorhabditis elegans, 725.7); AT1G45332 (Arabidopsis thaliana, 852.4)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:254102-256387:- | gene-YLR069C_AKU4011 | rna-NM_001181956.1_AKU4011 | cds-NP_013170.1_AKU4011 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000212.1:217243-219528:- | gene-YLR069C_BG1 | rna-NM_001181956.1_BG1 | cds-NP_013170.1_BG1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005514.1:264011-266296:- | gene-YLR069C_Bruggeman | rna-NM_001181956.1_Bruggeman | cds-NP_013170.1_Bruggeman | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:264328-266613:- | gene-YLR069C_CAT1 | rna-NM_001181956.1_CAT1 | cds-NP_013170.1_CAT1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005370.1:261218-263503:- | gene-YLR069C_CBS1585 | rna-NM_001181956.1_CBS1585 | cds-NP_013170.1_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005354.1:251840-254125:- | gene-YLR069C_CBS436 | rna-NM_001181956.1_CBS436 | cds-NP_013170.1_CBS436 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:259656-261941:- | gene-YLR069C_CBS6412 | rna-NM_001181956.1_CBS6412 | cds-NP_013170.1_CBS6412 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:261489-263774:- | gene-YLR069C_CBS6413 | rna-NM_001181956.1_CBS6413 | cds-NP_013170.1_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001533.1:256652-258937:- | gene-YLR069C_CENPK1137D | rna-NM_001181956.1_CENPK1137D | cds-NP_013170.1_CENPK1137D | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005482.1:253623-255908:- | gene-YLR069C_EthanolRed | rna-NM_001181956.1_EthanolRed | cds-NP_013170.1_EthanolRed | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005546.1:253499-255784:- | gene-YLR069C_FaliES1 | rna-NM_001181956.1_FaliES1 | cds-NP_013170.1_FaliES1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000129.1:28434-30719:- | gene-YLR069C_JAY291 | rna-NM_001181956.1_JAY291 | cds-NP_013170.1_JAY291 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005418.1:261380-263665:- | gene-YLR069C_MUCL30387 | rna-NM_001181956.1_MUCL30387 | cds-NP_013170.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005450.1:269023-271308:- | gene-YLR069C_MUCL30388 | rna-NM_001181956.1_MUCL30388 | cds-NP_013170.1_MUCL30388 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:261729-264014:- | gene-YLR069C_MUCL39482 | rna-NM_001181956.1_MUCL39482 | cds-NP_013170.1_MUCL39482 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005434.1:261650-263935:- | gene-YLR069C_MUCL42920 | rna-NM_001181956.1_MUCL42920 | cds-NP_013170.1_MUCL42920 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:271604-273889:- | gene-YLR069C_NCIM3186 | rna-NM_001181956.1_NCIM3186 | cds-NP_013170.1_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:253804-256089:- | gene-YLR069C_NCYC1407 | rna-NM_001181956.1_NCYC1407 | cds-NP_013170.1_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:259671-261956:- | gene-YLR069C_PE2H3 | rna-NM_001181956.1_PE2H3 | cds-NP_013170.1_PE2H3 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:259412-261697:- | gene-YLR069C_PE2H4 | rna-NM_001181956.1_PE2H4 | cds-NP_013170.1_PE2H4 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:271630-273915:- | gene-YLR069C_S288C | rna-NM_001181956.1_S288C | cds-NP_013170.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000033.1:100275-102560:+ | gene-YLR069C_SA1 | rna-NM_001181956.1_SA1 | cds-NP_013170.1_SA1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005498.1:253675-255960:- | gene-YLR069C_ThermosaccDry | rna-NM_001181956.1_ThermosaccDry | cds-NP_013170.1_ThermosaccDry | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005466.1:267364-269649:- | gene-YLR069C_VR1 | rna-NM_001181956.1_VR1 | cds-NP_013170.1_VR1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000023.1:253062-255347:- | gene-YLR069C_ZTW1 | rna-NM_001181956.1_ZTW1 | cds-NP_013170.1_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047498.1:261950-264235:- | gene-YLR069C_Sparadoxus | rna-NM_001181956.1_Sparadoxus | cds-NP_013170.1_Sparadoxus | 92.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |