Gene name: MED4
Reference locus (S288C): YOR174W
Gene biotype: protein_coding
Description: Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; essential for transcriptional regulation
Top 10 interactors (score): MED7 (0.999); SRB4 (0.999); SRB7 (0.999); CSE2 (0.999); MED8 (0.998); SOH1 (0.998); SRB6 (0.998); SRB5 (0.998); MED1 (0.997); MED6 (0.997); MED2 (0.996); SRB2 (0.996); NUT2 (0.995); RGR1 (0.994); MED11 (0.994); ROX3 (0.992); GAL11 (0.991); PGD1 (0.989); SIN4 (0.979); TAF14 (0.944)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005309.1:656386-657240:+ | gene-YOR174W_AKU4011 | rna-NM_001183593.3_AKU4011 | cds-NP_014817.3_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000123.1:58140-58994:+ | gene-YOR174W_BG1 | rna-NM_001183593.3_BG1 | cds-NP_014817.3_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005517.1:640459-641313:+ | gene-YOR174W_Bruggeman | rna-NM_001183593.3_Bruggeman | cds-NP_014817.3_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005533.1:640478-641332:+ | gene-YOR174W_CAT1 | rna-NM_001183593.3_CAT1 | cds-NP_014817.3_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005373.1:638881-639735:+ | gene-YOR174W_CBS1585 | rna-NM_001183593.3_CBS1585 | cds-NP_014817.3_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005357.1:637175-638029:+ | gene-YOR174W_CBS436 | rna-NM_001183593.3_CBS436 | cds-NP_014817.3_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005341.1:636493-637347:+ | gene-YOR174W_CBS6412 | rna-NM_001183593.3_CBS6412 | cds-NP_014817.3_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005325.1:645174-646028:+ | gene-YOR174W_CBS6413 | rna-NM_001183593.3_CBS6413 | cds-NP_014817.3_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001536.1:658503-659357:+ | gene-YOR174W_CENPK1137D | rna-NM_001183593.3_CENPK1137D | cds-NP_014817.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005485.1:632589-633443:+ | gene-YOR174W_EthanolRed | rna-NM_001183593.3_EthanolRed | cds-NP_014817.3_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005549.1:637442-638296:+ | gene-YOR174W_FaliES1 | rna-NM_001183593.3_FaliES1 | cds-NP_014817.3_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000070.1:5246-6100:- | gene-YOR174W_JAY291 | rna-NM_001183593.3_JAY291 | cds-NP_014817.3_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005421.1:645266-646120:+ | gene-YOR174W_MUCL30387 | rna-NM_001183593.3_MUCL30387 | cds-NP_014817.3_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005453.1:652030-652884:+ | gene-YOR174W_MUCL30388 | rna-NM_001183593.3_MUCL30388 | cds-NP_014817.3_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005293.1:646722-647576:+ | gene-YOR174W_MUCL39482 | rna-NM_001183593.3_MUCL39482 | cds-NP_014817.3_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005437.1:656143-656997:+ | gene-YOR174W_MUCL42920 | rna-NM_001183593.3_MUCL42920 | cds-NP_014817.3_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:658636-659490:+ | gene-YOR174W_NCIM3186 | rna-NM_001183593.3_NCIM3186 | cds-NP_014817.3_NCIM3186 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005277.1:646808-647662:+ | gene-YOR174W_NCYC1407 | rna-NM_001183593.3_NCYC1407 | cds-NP_014817.3_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994154.1:645319-646173:+ | gene-YOR174W_PE2H3 | rna-NM_001183593.3_PE2H3 | cds-NP_014817.3_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999886.1:655696-656550:+ | gene-YOR174W_PE2H4 | rna-NM_001183593.3_PE2H4 | cds-NP_014817.3_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:658747-659601:+ | gene-YOR174W_S288C | rna-NM_001183593.3_S288C | cds-NP_014817.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000006.1:75305-76159:+ | gene-YOR174W_SA1 | rna-NM_001183593.3_SA1 | cds-NP_014817.3_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005501.1:636625-637479:+ | gene-YOR174W_ThermosaccDry | rna-NM_001183593.3_ThermosaccDry | cds-NP_014817.3_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:700322-701176:+ | gene-YOR174W_VR1 | rna-NM_001183593.3_VR1 | cds-NP_014817.3_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000032.1:370076-370930:+ | gene-YOR174W_ZTW1 | rna-NM_001183593.3_ZTW1 | cds-NP_014817.3_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047501.1:641601-642455:+ | gene-YOR174W_Sparadoxus | rna-NM_001183593.3_Sparadoxus | cds-NP_014817.3_Sparadoxus | 87.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |