Gene name: MED1
Reference locus (S288C): YPR070W
Gene biotype: protein_coding
Description: Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; essential for transcriptional regulation
Top 10 interactors (score): CSE2 (0.999); SRB5 (0.997); MED4 (0.997); MED7 (0.997); SRB4 (0.996); SOH1 (0.996); MED8 (0.996); RGR1 (0.995); GAL11 (0.994); NUT2 (0.993); PGD1 (0.993); MED2 (0.993); SRB6 (0.991); SRB7 (0.991); SRB2 (0.99); ROX3 (0.986); NUT1 (0.98); SIN4 (0.979); MED6 (0.978); MED11 (0.959)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005310.1:657575-659275:+ | gene-YPR070W_AKU4011 | rna-NM_001184167.1_AKU4011 | cds-NP_015395.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000091.1:238415-240115:- | gene-YPR070W_BG1 | rna-NM_001184167.1_BG1 | cds-NP_015395.1_BG1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005518.1:735243-736943:+ | gene-YPR070W_Bruggeman | rna-NM_001184167.1_Bruggeman | cds-NP_015395.1_Bruggeman | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005534.1:778687-780387:+ | gene-YPR070W_CAT1 | rna-NM_001184167.1_CAT1 | cds-NP_015395.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005374.1:661263-662963:+ | gene-YPR070W_CBS1585 | rna-NM_001184167.1_CBS1585 | cds-NP_015395.1_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005358.1:675629-677329:+ | gene-YPR070W_CBS436 | rna-NM_001184167.1_CBS436 | cds-NP_015395.1_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005342.1:665010-666710:+ | gene-YPR070W_CBS6412 | rna-NM_001184167.1_CBS6412 | cds-NP_015395.1_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005326.1:658209-659909:+ | gene-YPR070W_CBS6413 | rna-NM_001184167.1_CBS6413 | cds-NP_015395.1_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001537.1:685861-687561:+ | gene-YPR070W_CENPK1137D | rna-NM_001184167.1_CENPK1137D | cds-NP_015395.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:984769-986469:+ | gene-YPR070W_EthanolRed | rna-NM_001184167.1_EthanolRed | cds-NP_015395.1_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005550.1:663406-665106:+ | gene-YPR070W_FaliES1 | rna-NM_001184167.1_FaliES1 | cds-NP_015395.1_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000446.1:35349-37049:+ | gene-YPR070W_JAY291 | rna-NM_001184167.1_JAY291 | cds-NP_015395.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005422.1:676503-678203:+ | gene-YPR070W_MUCL30387 | rna-NM_001184167.1_MUCL30387 | cds-NP_015395.1_MUCL30387 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005454.1:675208-676908:+ | gene-YPR070W_MUCL30388 | rna-NM_001184167.1_MUCL30388 | cds-NP_015395.1_MUCL30388 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005294.1:654520-656220:+ | gene-YPR070W_MUCL39482 | rna-NM_001184167.1_MUCL39482 | cds-NP_015395.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005438.1:717344-719044:+ | gene-YPR070W_MUCL42920 | rna-NM_001184167.1_MUCL42920 | cds-NP_015395.1_MUCL42920 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011825.1:685881-687581:+ | gene-YPR070W_NCIM3186 | rna-NM_001184167.1_NCIM3186 | cds-NP_015395.1_NCIM3186 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005278.1:662448-664148:+ | gene-YPR070W_NCYC1407 | rna-NM_001184167.1_NCYC1407 | cds-NP_015395.1_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994155.1:668652-670352:+ | gene-YPR070W_PE2H3 | rna-NM_001184167.1_PE2H3 | cds-NP_015395.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999887.1:668300-670000:+ | gene-YPR070W_PE2H4 | rna-NM_001184167.1_PE2H4 | cds-NP_015395.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001148.4:685898-687598:+ | gene-YPR070W_S288C | rna-NM_001184167.1_S288C | cds-NP_015395.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000026.1:13092-14792:- | gene-YPR070W_SA1 | rna-NM_001184167.1_SA1 | cds-NP_015395.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005502.1:663181-664881:+ | gene-YPR070W_ThermosaccDry | rna-NM_001184167.1_ThermosaccDry | cds-NP_015395.1_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005470.1:679326-681026:+ | gene-YPR070W_VR1 | rna-NM_001184167.1_VR1 | cds-NP_015395.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000033.1:662405-664105:+ | gene-YPR070W_ZTW1 | rna-NM_001184167.1_ZTW1 | cds-NP_015395.1_ZTW1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047502.1:663168-664868:+ | gene-YPR070W_Sparadoxus | rna-NM_001184167.1_Sparadoxus | cds-NP_015395.1_Sparadoxus | 89.0 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |