MDM36 (YPR083W)


Gene profile

Gene name: MDM36
Reference locus (S288C): YPR083W
Gene biotype: protein_coding

Description: Mitochondrial protein; required for normal mitochondrial morphology and inheritance; component of the mitochondria-ER-cortex-ancor (MECA); interacts with Num1p to link the ER and mitochondria at the cell cortex; proposed involvement in the formation of Dnm1p and Num1p-containing cortical anchor complexes that promote mitochondrial fission

Top 10 interactors (score): NUM1 (0.991); FZO1 (0.773); MMR1 (0.768); CAF4 (0.749); DNM1 (0.713); IME2 (0.694); MFB1 (0.691); YNL247W (0.654); MDM30 (0.629); SHE9 (0.617); MYO2 (0.597); FOL3 (0.567); MSD1 (0.56); FIS1 (0.526); UGO1 (0.499); YPT11 (0.497); MDV1 (0.483); TOM70 (0.476); PEX32 (0.451); VID28 (0.45)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005310.1:676536-678275:+ gene-YPR083W_AKU4011 rna-NM_001184180.1_AKU4011 cds-NP_015408.1_AKU4011 99.5 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000091.1:219405-221144:- gene-YPR083W_BG1 rna-NM_001184180.1_BG1 cds-NP_015408.1_BG1 99.7 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005518.1:754215-755954:+ gene-YPR083W_Bruggeman rna-NM_001184180.1_Bruggeman cds-NP_015408.1_Bruggeman 99.5 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005534.1:798516-800255:+ gene-YPR083W_CAT1 rna-NM_001184180.1_CAT1 cds-NP_015408.1_CAT1 99.5 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005374.1:680462-682201:+ gene-YPR083W_CBS1585 rna-NM_001184180.1_CBS1585 cds-NP_015408.1_CBS1585 99.1 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005358.1:695087-696826:+ gene-YPR083W_CBS436 rna-NM_001184180.1_CBS436 cds-NP_015408.1_CBS436 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005342.1:683598-685337:+ gene-YPR083W_CBS6412 rna-NM_001184180.1_CBS6412 cds-NP_015408.1_CBS6412 99.4 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005326.1:677419-679158:+ gene-YPR083W_CBS6413 rna-NM_001184180.1_CBS6413 cds-NP_015408.1_CBS6413 99.4 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001537.1:704833-706572:+ gene-YPR083W_CENPK1137D rna-NM_001184180.1_CENPK1137D cds-NP_015408.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005486.1:1003536-1005275:+ gene-YPR083W_EthanolRed rna-NM_001184180.1_EthanolRed cds-NP_015408.1_EthanolRed 99.5 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005550.1:682369-684108:+ gene-YPR083W_FaliES1 rna-NM_001184180.1_FaliES1 cds-NP_015408.1_FaliES1 99.5 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000094.1:4261-6000:+ gene-YPR083W_JAY291 rna-NM_001184180.1_JAY291 cds-NP_015408.1_JAY291 99.7 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005422.1:695474-697213:+ gene-YPR083W_MUCL30387 rna-NM_001184180.1_MUCL30387 cds-NP_015408.1_MUCL30387 99.5 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005454.1:694178-695917:+ gene-YPR083W_MUCL30388 rna-NM_001184180.1_MUCL30388 cds-NP_015408.1_MUCL30388 99.6 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005294.1:673469-675208:+ gene-YPR083W_MUCL39482 rna-NM_001184180.1_MUCL39482 cds-NP_015408.1_MUCL39482 99.1 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005438.1:736315-738054:+ gene-YPR083W_MUCL42920 rna-NM_001184180.1_MUCL42920 cds-NP_015408.1_MUCL42920 99.5 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011825.1:704837-706576:+ gene-YPR083W_NCIM3186 rna-NM_001184180.1_NCIM3186 cds-NP_015408.1_NCIM3186 99.4 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005278.1:681895-683634:+ gene-YPR083W_NCYC1407 rna-NM_001184180.1_NCYC1407 cds-NP_015408.1_NCYC1407 99.3 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994155.1:688297-690036:+ gene-YPR083W_PE2H3 rna-NM_001184180.1_PE2H3 cds-NP_015408.1_PE2H3 99.7 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999887.1:687945-689684:+ gene-YPR083W_PE2H4 rna-NM_001184180.1_PE2H4 cds-NP_015408.1_PE2H4 99.7 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001148.4:704854-706593:+ gene-YPR083W_S288C rna-NM_001184180.1_S288C cds-NP_015408.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000028.1:2974-4713:+ gene-YPR083W_SA1 rna-NM_001184180.1_SA1 cds-NP_015408.1_SA1 99.7 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005502.1:682144-683883:+ gene-YPR083W_ThermosaccDry rna-NM_001184180.1_ThermosaccDry cds-NP_015408.1_ThermosaccDry 99.5 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005470.1:698785-700524:+ gene-YPR083W_VR1 rna-NM_001184180.1_VR1 cds-NP_015408.1_VR1 99.8 100.0 Verified 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000033.1:681363-683102:+ gene-YPR083W_ZTW1 rna-NM_001184180.1_ZTW1 cds-NP_015408.1_ZTW1 99.7 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047502.1:682062-683798:+ gene-YPR083W_Sparadoxus rna-NM_001184180.1_Sparadoxus cds-NP_015408.1_Sparadoxus 89.4 99.8 Verified 1 1 1 False True False False False

Additional files