MDM34 (YGL219C)


Gene profile

Gene name: MDM34
Reference locus (S288C): YGL219C
Gene biotype: protein_coding

Description: Mitochondrial distribution and morphology protein 34; Mitochondrial component of the ERMES complex; links the ER to mitochondria and may promote inter-organellar calcium and phospholipid exchange as well as coordinating mitochondrial DNA replication and growth; required for mitophagy; ERMES complex is often co-localized with peroxisomes and with concentrated areas of pyruvate dehydrogenase

Top 10 interactors (score): MDM10 (0.999); MDM12 (0.999); MMM1 (0.998); GEM1 (0.996); PEX11 (0.994); DNM1 (0.971); TOM70 (0.947); SAM50 (0.927); TOM40 (0.926); SAM35 (0.912); SAM37 (0.894); TOM22 (0.881); POR1 (0.863); MDM31 (0.863); TOM7 (0.862); PSD1 (0.84); TOM20 (0.84); TOM5 (0.839); CDC48 (0.834); LAM6 (0.814)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005301.1:84220-85599:- gene-YGL219C_AKU4011 rna-NM_001181084.1_AKU4011 cds-NP_011296.1_AKU4011 99.5 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000175.1:77283-78662:- gene-YGL219C_BG1 rna-NM_001181084.1_BG1 cds-NP_011296.1_BG1 99.9 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005509.1:84730-86109:- gene-YGL219C_Bruggeman rna-NM_001181084.1_Bruggeman cds-NP_011296.1_Bruggeman 100.0 100.0 Verified 1 1 1 True True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005525.1:83393-84772:- gene-YGL219C_CAT1 rna-NM_001181084.1_CAT1 cds-NP_011296.1_CAT1 99.9 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005365.1:88525-89904:- gene-YGL219C_CBS1585 rna-NM_001181084.1_CBS1585 cds-NP_011296.1_CBS1585 99.5 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005349.1:84087-85466:- gene-YGL219C_CBS436 rna-NM_001181084.1_CBS436 cds-NP_011296.1_CBS436 99.9 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005333.1:75656-77035:- gene-YGL219C_CBS6412 rna-NM_001181084.1_CBS6412 cds-NP_011296.1_CBS6412 99.5 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005317.1:82360-83739:- gene-YGL219C_CBS6413 rna-NM_001181084.1_CBS6413 cds-NP_011296.1_CBS6413 99.5 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001528.1:82912-84291:- gene-YGL219C_CENPK1137D rna-NM_001181084.1_CENPK1137D cds-NP_011296.1_CENPK1137D 99.9 100.0 Verified 1 1 1 False True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005477.1:75022-76401:- gene-YGL219C_EthanolRed rna-NM_001181084.1_EthanolRed cds-NP_011296.1_EthanolRed 99.4 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005541.1:75865-77244:- gene-YGL219C_FaliES1 rna-NM_001181084.1_FaliES1 cds-NP_011296.1_FaliES1 99.4 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000397.1:2269-3648:- gene-YGL219C_JAY291 rna-NM_001181084.1_JAY291 cds-NP_011296.1_JAY291 99.9 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005413.1:84646-86025:- gene-YGL219C_MUCL30387 rna-NM_001181084.1_MUCL30387 cds-NP_011296.1_MUCL30387 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005445.1:86825-88204:- gene-YGL219C_MUCL30388 rna-NM_001181084.1_MUCL30388 cds-NP_011296.1_MUCL30388 100.0 100.0 Verified 1 1 1 True True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005285.1:85038-86417:- gene-YGL219C_MUCL39482 rna-NM_001181084.1_MUCL39482 cds-NP_011296.1_MUCL39482 99.5 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005429.1:88144-89523:- gene-YGL219C_MUCL42920 rna-NM_001181084.1_MUCL42920 cds-NP_011296.1_MUCL42920 100.0 100.0 Verified 1 1 1 True True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011816.1:82878-84257:- gene-YGL219C_NCIM3186 rna-NM_001181084.1_NCIM3186 cds-NP_011296.1_NCIM3186 99.5 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005269.1:76757-78136:- gene-YGL219C_NCYC1407 rna-NM_001181084.1_NCYC1407 cds-NP_011296.1_NCYC1407 99.5 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994146.1:79586-80965:- gene-YGL219C_PE2H3 rna-NM_001181084.1_PE2H3 cds-NP_011296.1_PE2H3 99.9 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999878.1:79134-80513:- gene-YGL219C_PE2H4 rna-NM_001181084.1_PE2H4 cds-NP_011296.1_PE2H4 99.9 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001139.9:82878-84257:- gene-YGL219C_S288C rna-NM_001181084.1_S288C cds-NP_011296.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000002.1:291030-292409:+ gene-YGL219C_SA1 rna-NM_001181084.1_SA1 cds-NP_011296.1_SA1 99.9 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005493.1:76126-77505:- gene-YGL219C_ThermosaccDry rna-NM_001181084.1_ThermosaccDry cds-NP_011296.1_ThermosaccDry 99.4 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005461.1:83999-85378:- gene-YGL219C_VR1 rna-NM_001181084.1_VR1 cds-NP_011296.1_VR1 99.8 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000014.1:75175-76554:- gene-YGL219C_ZTW1 rna-NM_001181084.1_ZTW1 cds-NP_011296.1_ZTW1 99.5 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047493.1:82195-83574:- gene-YGL219C_Sparadoxus rna-NM_001181084.1_Sparadoxus cds-NP_011296.1_Sparadoxus 90.6 100.0 Verified 1 1 1 False True False False False

Additional files