MDM12 (YOL009C)


Gene profile

Gene name: MDM12
Reference locus (S288C): YOL009C
Gene biotype: protein_coding

Description: Mitochondrial distribution and morphology protein 12; Mitochondrial outer membrane protein, ERMES complex subunit; required for transmission of mitochondria to daughter cells; required for mitophagy; may influence import and assembly of outer membrane beta-barrel proteins; ERMES complex is often co-localized with peroxisomes and with concentrated areas of pyruvate dehydrogenase

Top 10 interactors (score): MMM1 (0.999); MDM34 (0.999); MDM10 (0.999); GEM1 (0.987); SAM37 (0.957); TOM7 (0.954); SAM35 (0.949); SAM50 (0.931); TOM40 (0.926); TOM70 (0.921); DNM1 (0.915); TOM22 (0.901); TOM5 (0.897); MDM31 (0.867); TOM6 (0.854); TOM20 (0.853); MCP1 (0.831); MCP2 (0.83); PUF3 (0.793); POR1 (0.789)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005309.1:293688-294503:- gene-YOL009C_AKU4011 rna-NM_001183263.1_AKU4011 cds-NP_014634.1_AKU4011 99.5 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000152.1:109297-110112:- gene-YOL009C_BG1 rna-NM_001183263.1_BG1 cds-NP_014634.1_BG1 99.7 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005517.1:296503-297318:- gene-YOL009C_Bruggeman rna-NM_001183263.1_Bruggeman cds-NP_014634.1_Bruggeman 99.8 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005533.1:294642-295457:- gene-YOL009C_CAT1 rna-NM_001183263.1_CAT1 cds-NP_014634.1_CAT1 99.6 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005373.1:288364-289179:- gene-YOL009C_CBS1585 rna-NM_001183263.1_CBS1585 cds-NP_014634.1_CBS1585 99.5 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005357.1:292630-293445:- gene-YOL009C_CBS436 rna-NM_001183263.1_CBS436 cds-NP_014634.1_CBS436 99.6 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005341.1:287715-288530:- gene-YOL009C_CBS6412 rna-NM_001183263.1_CBS6412 cds-NP_014634.1_CBS6412 99.5 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005325.1:295248-296063:- gene-YOL009C_CBS6413 rna-NM_001183263.1_CBS6413 cds-NP_014634.1_CBS6413 99.5 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001536.1:309063-309878:- gene-YOL009C_CENPK1137D rna-NM_001183263.1_CENPK1137D cds-NP_014634.1_CENPK1137D 99.5 100.0 Verified 1 1 1 False True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005485.1:290500-291315:- gene-YOL009C_EthanolRed rna-NM_001183263.1_EthanolRed cds-NP_014634.1_EthanolRed 99.5 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005549.1:293827-294642:- gene-YOL009C_FaliES1 rna-NM_001183263.1_FaliES1 cds-NP_014634.1_FaliES1 99.5 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000015.1:34621-35436:+ gene-YOL009C_JAY291 rna-NM_001183263.1_JAY291 cds-NP_014634.1_JAY291 99.8 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005421.1:300712-301527:- gene-YOL009C_MUCL30387 rna-NM_001183263.1_MUCL30387 cds-NP_014634.1_MUCL30387 99.6 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005453.1:304150-304965:- gene-YOL009C_MUCL30388 rna-NM_001183263.1_MUCL30388 cds-NP_014634.1_MUCL30388 99.7 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005293.1:295847-296662:- gene-YOL009C_MUCL39482 rna-NM_001183263.1_MUCL39482 cds-NP_014634.1_MUCL39482 99.5 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005437.1:310760-311575:- gene-YOL009C_MUCL42920 rna-NM_001183263.1_MUCL42920 cds-NP_014634.1_MUCL42920 99.5 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011824.1:309213-310028:- gene-YOL009C_NCIM3186 rna-NM_001183263.1_NCIM3186 cds-NP_014634.1_NCIM3186 99.3 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005277.1:302580-303395:- gene-YOL009C_NCYC1407 rna-NM_001183263.1_NCYC1407 cds-NP_014634.1_NCYC1407 99.5 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994154.1:297219-298034:- gene-YOL009C_PE2H3 rna-NM_001183263.1_PE2H3 cds-NP_014634.1_PE2H3 99.8 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999886.1:307618-308433:- gene-YOL009C_PE2H4 rna-NM_001183263.1_PE2H4 cds-NP_014634.1_PE2H4 99.8 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001147.6:309324-310139:- gene-YOL009C_S288C rna-NM_001183263.1_S288C cds-NP_014634.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000001.1:277306-278121:- gene-YOL009C_SA1 rna-NM_001183263.1_SA1 cds-NP_014634.1_SA1 99.7 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005501.1:292398-293213:- gene-YOL009C_ThermosaccDry rna-NM_001183263.1_ThermosaccDry cds-NP_014634.1_ThermosaccDry 99.5 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005469.1:293181-293996:- gene-YOL009C_VR1 rna-NM_001183263.1_VR1 cds-NP_014634.1_VR1 99.7 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000032.1:27064-27879:- gene-YOL009C_ZTW1 rna-NM_001183263.1_ZTW1 cds-NP_014634.1_ZTW1 99.6 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047501.1:300684-301499:- gene-YOL009C_Sparadoxus rna-NM_001183263.1_Sparadoxus cds-NP_014634.1_Sparadoxus 89.5 100.0 Verified 1 1 1 False True False False False

Additional files